RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 GARTP22102 1010 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 CUL2Q13617 745 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
SCAF11-209ENST00000547018 C1orf131Q8NDD1 294 aaKnown RBP13.59□□□□□ -0.23
SCAF11-209ENST00000547018 LRRC4CQ9HCJ2 640 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 PDLIM7Q9NR12 457 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 RNF14Q9UBS8 474 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 HES2Q9Y543 173 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 PSME4Q14997 1843 aa13.59□□□□□ -0.23
SCAF11-209ENST00000547018 NFASCO94856 1347 aa13.58□□□□□ -0.23
SCAF11-209ENST00000547018 CNMDO75829 334 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 KRT10P13645 584 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 RPL7AP62424 266 aaKnown RBP13.58□□□□□ -0.24
SCAF11-209ENST00000547018 GHRHRQ02643 423 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ZACNQ401N2 412 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 UBAP2Q5T6F2 1119 aaKnown RBP13.58□□□□□ -0.24
SCAF11-209ENST00000547018 CCDC137Q6PK04 289 aaKnown RBP13.58□□□□□ -0.24
SCAF11-209ENST00000547018 MRPL4Q9BYD3 311 aaKnown RBP13.58□□□□□ -0.24
SCAF11-209ENST00000547018 PHIPQ8WWQ0 1821 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 TCF4P15884 667 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ARL2P36404 184 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 GNGT1P63211 74 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 GUCY1A3Q02108 690 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 MYBPC2Q14324 1141 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 AMHR2Q16671 573 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 KRT71Q3SY84 523 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 CELF3Q5SZQ8 465 aaKnown RBP13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SYCP2LQ5T4T6 812 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 EMBQ6PCB8 327 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 C12orf56Q8IXR9 622 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ZDHHC14Q8IZN3 488 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SLC17A8Q8NDX2 589 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 TMC2Q8TDI7 906 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SCFD2Q8WU76 684 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SENP7Q9BQF6 1050 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ZSWIM1Q9BR11 485 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SYT11Q9BT88 431 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 C10orf88Q9H8K7 445 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 C17orf75Q9HAS0 396 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 MED4Q9NPJ6 270 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 PPP2R3BQ9Y5P8 575 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 VGLL3A8MV65 326 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SMTNL2Q2TAL5 461 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 SH3D19Q5HYK7 790 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 FBXO25Q8TCJ0 367 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 ST6GALNAC4Q9H4F1 302 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 CPA4Q9UI42 421 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 STXBP5LQ9Y2K9 1186 aa13.58□□□□□ -0.24
SCAF11-209ENST00000547018 A0A0B4J269 797 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 P4HA2O15460 535 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 GRAP2O75791 330 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 C4BPAP04003 597 aaKnown RBP13.57□□□□□ -0.24
SCAF11-209ENST00000547018 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
SCAF11-209ENST00000547018 ZNF699Q32M78 642 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 NOL9Q5SY16 702 aaKnown RBP13.57□□□□□ -0.24
SCAF11-209ENST00000547018 ATF7IP2Q5U623 682 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 SLFN12LQ6IEE8 588 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 ACAD10Q6JQN1 1059 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 GSTA5Q7RTV2 222 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 MPHOSPH6Q99547 160 aaKnown RBP13.57□□□□□ -0.24
SCAF11-209ENST00000547018 ISCUQ9H1K1 167 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 MYPNQ86TC9 1320 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 TLR3O15455 904 aaKnown RBP13.57□□□□□ -0.24
SCAF11-209ENST00000547018 DYNC1LI2O43237 492 aaPredicted RBP13.57□□□□□ -0.24
SCAF11-209ENST00000547018 HSD17B3P37058 310 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 SNAPC2Q13487 334 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 KCNT1Q5JUK3 1230 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 UBXN6Q9BZV1 441 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 GDF3Q9NR23 364 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 PCDHB2Q9Y5E7 798 aa13.57□□□□□ -0.24
SCAF11-209ENST00000547018 OPA1O60313 960 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 IFNB1P01574 187 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 PSMD6Q15008 389 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 SLFN11Q7Z7L1 901 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 EMC1Q8N766 993 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 PPANQ9NQ55 473 aaKnown RBP13.56□□□□□ -0.24
SCAF11-209ENST00000547018 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 PCSK1NQ9UHG2 260 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 TTC7AQ9ULT0 858 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-209ENST00000547018 MAFO75444 373 aaPredicted RBP13.56□□□□□ -0.24
SCAF11-209ENST00000547018 TOM1L1O75674 476 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 RARAP10276 462 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 CLEC16AQ2KHT3 1053 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 GPAT2Q6NUI2 795 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 TTC27Q6P3X3 843 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 JAMLQ86YT9 394 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 PRELID2Q8N945 189 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 GPRC5AQ8NFJ5 357 aa13.56□□□□□ -0.24
SCAF11-209ENST00000547018 IPO4Q8TEX9 1081 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms