RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SLC7A14Q8TBB6 771 aa15.71■□□□□ 0.11
COL2A1-209ENST00000546974 ATOH1Q92858 354 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-209ENST00000546974 C18orf25Q96B23 403 aaPredicted RBP15.71■□□□□ 0.11
COL2A1-209ENST00000546974 TBC1D4O60343 1298 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 AOC1P19801 751 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 MATR3P43243 847 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL2A1-209ENST00000546974 NTHL1P78549 312 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 HTR4Q13639 388 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 MRPL58Q14197 206 aaKnown RBP15.7■□□□□ 0.1
COL2A1-209ENST00000546974 SF3A1Q15459 793 aaKnown RBP15.7■□□□□ 0.1
COL2A1-209ENST00000546974 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
COL2A1-209ENST00000546974 SLC8B1Q6J4K2 584 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 SIX5Q8N196 739 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 LRRC15Q8TF66 581 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 RTP3Q9BQQ7 232 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 REEP2Q9BRK0 252 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 HAPLN2Q9GZV7 340 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 PLEKHA5Q9HAU0 1116 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 BLOC1S4Q9NUP1 217 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 CDH7Q9ULB5 785 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 POLIQ9UNA4 740 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 NUB1Q9Y5A7 615 aa15.7■□□□□ 0.1
COL2A1-209ENST00000546974 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.7■□□□□ 0.1
COL2A1-209ENST00000546974 MYH15Q9Y2K3 1946 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 H0Y858 1186 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 H7C4K7 107 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 ABLIM3O94929 683 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 FAM13AO94988 1023 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 CFHP08603 1231 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 CLTAP09496 248 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 PDCP20941 246 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 ZNF131P52739 623 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 ROR1Q01973 937 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 GRIN1Q05586 938 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 MCM6Q14566 821 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 KYAT1Q16773 422 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 SEZ6Q53EL9 994 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 MYCT1Q8N699 235 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 ZNF461Q8TAF7 563 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 RAD54LQ92698 747 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 FGF13Q92913 245 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 BICD1Q96G01 975 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 SUSD3Q96L08 255 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 CCSER1Q9C0I3 900 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 PARVGQ9HBI0 331 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 FAM86C1Q9NVL1 165 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 KCNH3Q9ULD8 1083 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 TBX20Q9UMR3 447 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 NUMBLQ9Y6R0 609 aa15.69■□□□□ 0.1
COL2A1-209ENST00000546974 TTC26A0AVF1 554 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 VPS37CA5D8V6 355 aaPredicted RBP15.68■□□□□ 0.1
COL2A1-209ENST00000546974 KRBA1A5PL33 1030 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 TRAK2O60296 914 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 PIGRP01833 764 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 CXCL8P10145 99 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 PLCG1P19174 1290 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 ELF1P32519 619 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 ABCD1P33897 745 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 LIG4P49917 911 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
COL2A1-209ENST00000546974 KARSQ15046 597 aaKnown RBP15.68■□□□□ 0.1
COL2A1-209ENST00000546974 MTSS1LQ765P7 747 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 RASSF8Q8NHQ8 419 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 SLC2A4RGQ9NR83 387 aa15.68■□□□□ 0.1
COL2A1-209ENST00000546974 DNMT3BQ9UBC3 853 aaKnown RBP15.68■□□□□ 0.1
COL2A1-209ENST00000546974 CFAP54Q96N23 3096 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 ZFHX2Q9C0A1 2572 aaPredicted RBP15.67■□□□□ 0.1
COL2A1-209ENST00000546974 ARHGEF37A1IGU5 675 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 WDR27A2RRH5 827 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 K7ENM7 598 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 PI15O43692 258 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 KRT18P05783 430 aaKnown RBP15.67■□□□□ 0.1
COL2A1-209ENST00000546974 ATF2P15336 505 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 CYP3A5P20815 502 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 LRPAP1P30533 357 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 MCM4P33991 863 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 DDIT3P35638 169 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 ZBTB6Q15916 424 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 PABPC1LQ4VXU2 614 aaKnown RBP15.67■□□□□ 0.1
COL2A1-209ENST00000546974 TPGS2Q68CL5 300 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 PARM1Q6UWI2 310 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 APPL2Q8NEU8 664 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 ITFG1Q8TB96 612 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 GPR152Q8TDT2 470 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 LARP4BQ92615 738 aaKnown RBP15.67■□□□□ 0.1
COL2A1-209ENST00000546974 DDX12PQ92771 950 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 FGF14Q92915 247 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 TSPAN18Q96SJ8 248 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 AVENQ9NQS1 362 aaPredicted RBP15.67■□□□□ 0.1
COL2A1-209ENST00000546974 HCFC1R1Q9NWW0 138 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 TUBGCP4Q9UGJ1 667 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 FBXL5Q9UKA1 691 aa15.67■□□□□ 0.1
COL2A1-209ENST00000546974 UBQLN1Q9UMX0 589 aaKnown RBP15.67■□□□□ 0.1
COL2A1-209ENST00000546974 LACTBL1A8MY62 500 aa15.66■□□□□ 0.1
COL2A1-209ENST00000546974 PROB1E7EW31 1015 aa15.66■□□□□ 0.1
COL2A1-209ENST00000546974 HNRNPDLO14979 420 aaKnown RBP15.66■□□□□ 0.1
COL2A1-209ENST00000546974 OGTO15294 1046 aa15.66■□□□□ 0.1
COL2A1-209ENST00000546974 XPOTO43592 962 aaKnown RBP15.66■□□□□ 0.1
COL2A1-209ENST00000546974 FAM189A1O60320 539 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms