RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CTCFP49711 727 aaPredicted RBP15.58■□□□□ 0.08
HOXC11-202ENST00000546378 TLCD1Q96CP7 247 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 AGBL1Q96MI9 1066 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 GLIS2Q9BZE0 524 aaPredicted RBP15.58■□□□□ 0.08
HOXC11-202ENST00000546378 UNC45AQ9H3U1 944 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 GINM1Q9NU53 330 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 HSPBP1Q9NZL4 362 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 PCSK1NQ9UHG2 260 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 STXBP5LQ9Y2K9 1186 aa15.58■□□□□ 0.08
HOXC11-202ENST00000546378 DNAH12Q6ZR08 3092 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 TNS1Q9HBL0 1735 aaKnown RBP15.57■□□□□ 0.08
HOXC11-202ENST00000546378 IPO5O00410 1097 aaKnown RBP15.57■□□□□ 0.08
HOXC11-202ENST00000546378 TAF1BQ53T94 588 aaPredicted RBP15.57■□□□□ 0.08
HOXC11-202ENST00000546378 ZNF720Q7Z2F6 126 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 STMN4Q9H169 189 aaPredicted RBP15.57■□□□□ 0.08
HOXC11-202ENST00000546378 FBXO6Q9NRD1 293 aaPredicted RBP15.57■□□□□ 0.08
HOXC11-202ENST00000546378 PACSIN3Q9UKS6 424 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 TRAF3IP3Q9Y228 551 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 ARL2BPQ9Y2Y0 163 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 A0A1B0GUL6 1792 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 LRRD1A4D1F6 860 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 SSTR1P30872 391 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 RPA3P35244 121 aaPredicted RBP15.57■□□□□ 0.08
HOXC11-202ENST00000546378 FAXCQ5TGI0 409 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 RFWD3Q6PCD5 774 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 TMEM270Q6UE05 265 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 CCDC124Q96CT7 223 aaKnown RBP15.57■□□□□ 0.08
HOXC11-202ENST00000546378 ATP6V0A4Q9HBG4 840 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 PHTF1Q9UMS5 762 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 ROBO3Q96MS0 1386 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 SMCHD1A6NHR9 2005 aa15.57■□□□□ 0.08
HOXC11-202ENST00000546378 TXNDC9O14530 226 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 CSDE1O75534 798 aaKnown RBP15.56■□□□□ 0.08
HOXC11-202ENST00000546378 EYA4O95677 639 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 CNGA1P29973 690 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 TUBP50607 506 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 KDSRQ06136 332 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 VSTM1Q6UX27 236 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 DLK2Q6UY11 383 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 PPP4R3CPQ6ZMV5 832 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 ETNPPLQ8TBG4 499 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 AGR3Q8TD06 166 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 CCDC77Q9BR77 488 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 TMEM121Q9BTD3 319 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 KCNMB3Q9NPA1 279 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 PIH1D1Q9NWS0 290 aaKnown RBP15.56■□□□□ 0.08
HOXC11-202ENST00000546378 RFC5P40937 340 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 MGAT5Q09328 741 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 PDIA2Q13087 525 aaKnown RBP15.56■□□□□ 0.08
HOXC11-202ENST00000546378 PPP2R5CQ13362 524 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 KIF22Q14807 665 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 SLMAPQ14BN4 828 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 RNF220Q5VTB9 566 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 TMEM154Q6P9G4 183 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 FAXDC2Q96IV6 333 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 NINJ2Q9NZG7 142 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 PRR12Q9ULL5 1215 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 CCDC160A6NGH7 325 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 PTGIRP43119 386 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 DCUN1D2Q6PH85 259 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 HAUS6Q7Z4H7 955 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 TMEM130Q8N3G9 435 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 NETO2Q8NC67 525 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 UCMAQ8WVF2 138 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 PPP1R36Q96LQ0 422 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 SLC13A1Q9BZW2 595 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 TRABDQ9H4I3 376 aa15.56■□□□□ 0.08
HOXC11-202ENST00000546378 ESYT2A0FGR8 921 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 MAP3K13O43283 966 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 ADRB2P07550 413 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 KRT4P19013 534 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 NSFP46459 744 aaKnown RBP15.55■□□□□ 0.08
HOXC11-202ENST00000546378 ARSEP51690 589 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 BASP1P80723 227 aaKnown RBP15.55■□□□□ 0.08
HOXC11-202ENST00000546378 IL9RQ01113 521 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 DHX34Q14147 1143 aaKnown RBP15.55■□□□□ 0.08
HOXC11-202ENST00000546378 PRR11Q96HE9 360 aaPredicted RBP15.55■□□□□ 0.08
HOXC11-202ENST00000546378 RPS6KC1Q96S38 1066 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 SMYD3Q9H7B4 428 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 SPON1Q9HCB6 807 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 LARSQ9P2J5 1176 aaKnown RBP15.55■□□□□ 0.08
HOXC11-202ENST00000546378 RARGP13631 454 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 JAM2P57087 298 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 LVRNQ6Q4G3 990 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 TMEM179Q6ZVK1 233 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 STXBP4Q6ZWJ1 553 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 RHOT2Q8IXI1 618 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 PLEKHO2Q8TD55 490 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 RUBCNQ92622 972 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 SMC6Q96SB8 1091 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 PODXLO00592 558 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 DNAJC8O75937 253 aaPredicted RBP15.55■□□□□ 0.08
HOXC11-202ENST00000546378 ETS2P15036 469 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 CYP4A22Q5TCH4 519 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 PPP1R21Q6ZMI0 780 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 RASGEF1CQ8N431 466 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 IL31RAQ8NI17 732 aa15.55■□□□□ 0.08
HOXC11-202ENST00000546378 EPS8L1Q8TE68 723 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms