RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 UBXN11Q5T124 520 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 JADE1Q6IE81 842 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 FAM228AQ86W67 206 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 USP38Q8NB14 1042 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 KIF18AQ8NI77 898 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 SLC30A5Q8TAD4 765 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 SH3TC2Q8TF17 1288 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 KAT5Q92993 513 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 WNT8BQ93098 351 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 PI4K2AQ9BTU6 479 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.94□□□□□ -0.66
CIT-218ENST00000546026 EIF2AQ9BY44 585 aaKnown RBP10.94□□□□□ -0.66
CIT-218ENST00000546026 IFIH1Q9BYX4 1025 aaKnown RBP10.94□□□□□ -0.66
CIT-218ENST00000546026 TRIM6Q9C030 488 aaPredicted RBP10.94□□□□□ -0.66
CIT-218ENST00000546026 MTMR12Q9C0I1 747 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 LZTFL1Q9NQ48 299 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 PAK6Q9NQU5 681 aaPredicted RBP10.94□□□□□ -0.66
CIT-218ENST00000546026 SNTG2Q9NY99 539 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 ADAMTS1Q9UHI8 967 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 CNTN6Q9UQ52 1028 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 NOD1Q9Y239 953 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 PAXBP1Q9Y5B6 917 aa10.94□□□□□ -0.66
CIT-218ENST00000546026 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 ARVCFO00192 962 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 DNM1LO00429 736 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 STAU1O95793 577 aaKnown RBP10.93□□□□□ -0.66
CIT-218ENST00000546026 NFICP08651 508 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 PNMA6AP0CW24 399 aaPredicted RBP10.93□□□□□ -0.66
CIT-218ENST00000546026 THPOP40225 353 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 MYL6P60660 151 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 NOP14P78316 857 aaKnown RBP10.93□□□□□ -0.66
CIT-218ENST00000546026 TMEM132DQ14C87 1099 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 ZBTB6Q15916 424 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 XKR4Q5GH76 650 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 CCDC122Q5T0U0 273 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 ALKBH5Q6P6C2 394 aaKnown RBP10.93□□□□□ -0.66
CIT-218ENST00000546026 ALKAL1Q6UXT8 129 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
CIT-218ENST00000546026 SNX27Q96L92 541 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 AGPAT1Q99943 283 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 APOBEC3GQ9HC16 384 aaKnown RBP10.93□□□□□ -0.66
CIT-218ENST00000546026 STARD7Q9NQZ5 370 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 ITGA11Q9UKX5 1188 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 INTUQ9ULD6 942 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 NENFQ9UMX5 172 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 ST3GAL5Q9UNP4 418 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 NUB1Q9Y5A7 615 aa10.93□□□□□ -0.66
CIT-218ENST00000546026 A0A0U1RQJ8 604 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 RCCD1A6NED2 376 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 BTNL10A8MVZ5 291 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 DDX3XO00571 662 aaKnown RBP eCLIP10.92□□□□□ -0.66
CIT-218ENST00000546026 SGPL1O95470 568 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 ACO1P21399 889 aaKnown RBP10.92□□□□□ -0.66
CIT-218ENST00000546026 USP8P40818 1118 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 CDK7P50613 346 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 C1QTNF8P60827 252 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 GNG11P61952 73 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 YWHAEP62258 255 aaKnown RBP10.92□□□□□ -0.66
CIT-218ENST00000546026 RBP5P82980 135 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 FBXO47Q5MNV8 452 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 SPOPLQ6IQ16 392 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 SYT10Q6XYQ8 523 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 ZNF677Q86XU0 584 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 GPIHBP1Q8IV16 184 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 HACE1Q8IYU2 909 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 UBR7Q8N806 425 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 C1orf127Q8N9H9 656 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 OLIG1Q8TAK6 271 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 CXorf38Q8TB03 319 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 LNX1Q8TBB1 728 aaPredicted RBP10.92□□□□□ -0.66
CIT-218ENST00000546026 ATRIPQ8WXE1 791 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 KIF12Q96FN5 646 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 FAM84AQ96KN4 292 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 TRAIPQ9BWF2 469 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 NIF3L1Q9GZT8 377 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 XYLT2Q9H1B5 865 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 FAM124BQ9H5Z6 455 aaPredicted RBP10.92□□□□□ -0.66
CIT-218ENST00000546026 ERVK-5Q9HDB9 667 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 DPP3Q9NY33 737 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 CNTN3Q9P232 1028 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 SIX4Q9UIU6 781 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 NAGPAQ9UK23 515 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 OGDHLQ9ULD0 1010 aa10.92□□□□□ -0.66
CIT-218ENST00000546026 R3HCC1Q9Y3T6 440 aaKnown RBP10.92□□□□□ -0.66
CIT-218ENST00000546026 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.92□□□□□ -0.66
CIT-218ENST00000546026 RALGAPA2Q2PPJ7 1873 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 CYP26A1O43174 497 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 XPOTO43592 962 aaKnown RBP10.91□□□□□ -0.66
CIT-218ENST00000546026 RECQL4O94761 1208 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 ITGB3P05106 788 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 CTSHP09668 335 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 H2AFZP0C0S5 128 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 CCL5P13501 91 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 KCNE1P15382 129 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 ZSCAN20P17040 1043 aaPredicted RBP10.91□□□□□ -0.66
CIT-218ENST00000546026 CYP3A5P20815 502 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 CASQ1P31415 396 aa10.91□□□□□ -0.66
CIT-218ENST00000546026 ZNF699Q32M78 642 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms