RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 PDGFBP01127 241 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 HMGB1P09429 215 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 MYBP10242 640 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 HOXB8P17481 243 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 ATF7P17544 494 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 GNA11P29992 359 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 DNM2P50570 870 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 VCPP55072 806 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 BCAR1P56945 870 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 NLRP5P59047 1200 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 PLCB3Q01970 1234 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 RNASELQ05823 741 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 AP3B2Q13367 1082 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 KRT32Q14532 448 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 SMC1AQ14683 1233 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 TRIP4Q15650 581 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 ZNF124Q15973 351 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 PFKFB3Q16875 520 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 ATAT1Q5SQI0 421 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 RARS2Q5T160 578 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 MCTP2Q6DN12 878 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 TMEM184AQ6ZMB5 413 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 ECHDC2Q86YB7 292 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 SMAP1Q8IYB5 467 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 VPS52Q8N1B4 723 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 REXO1Q8N1G1 1221 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 ZNF713Q8N859 430 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 FLCNQ8NFG4 579 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 BICD2Q8TD16 824 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 CCDC12Q8WUD4 166 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 AUTS2Q8WXX7 1259 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 SUSD6Q92537 303 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 BRF1Q92994 677 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 LPPQ93052 612 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 FAM84AQ96KN4 292 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 JAKMIP1Q96N16 626 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 PRRX2Q99811 253 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 SLC26A6Q9BXS9 759 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 GCOM2Q9BZD3 368 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 GBP3Q9H0R5 595 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 SLKQ9H2G2 1235 aaPredicted RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 ADAMTS10Q9H324 1103 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 ELAC1Q9H777 363 aaKnown RBP4.52□□□□□ -1.69
MDM1-215ENST00000545964 STIM2Q9P246 746 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 CEP131Q9UPN4 1083 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 LZTS1Q9Y250 596 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 INPP5FQ9Y2H2 1132 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 NR2E1Q9Y466 385 aa4.52□□□□□ -1.69
MDM1-215ENST00000545964 MICAL3Q7RTP6 2002 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 SIP14410 1827 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 TRIOO75962 3097 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 A0A087WZ62 844 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 A0A0U1RQF3 1178 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 FSD2A1L4K1 749 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 CARNS1A5YM72 827 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 TMEM150BA6NC51 233 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 C2orf71A6NGG8 1288 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 C2CD4DB7Z1M9 353 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 MSH4O15457 936 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 CYP26A1O43174 497 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 ZNF862O60290 1169 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 MARCH6O60337 910 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 CLASP2O75122 1294 aaKnown RBP4.51□□□□□ -1.69
MDM1-215ENST00000545964 ZC3H11AO75152 810 aaKnown RBP eCLIP4.51□□□□□ -1.69
MDM1-215ENST00000545964 EOMESO95936 686 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 ALDH2P05091 517 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 SSBP05455 408 aaKnown RBP eCLIP4.51□□□□□ -1.69
MDM1-215ENST00000545964 ASGR2P07307 311 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 SRGAP2CP0DJJ0 459 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 DARSP14868 501 aaKnown RBP4.51□□□□□ -1.69
MDM1-215ENST00000545964 EPCAMP16422 314 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 KLRC2P26717 231 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 PPM1AP35813 382 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 GPC3P51654 580 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 USP11P51784 963 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 CDC42EP1Q00587 391 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 PRKCEQ02156 737 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 SSRP1Q08945 709 aaKnown RBP4.51□□□□□ -1.69
MDM1-215ENST00000545964 TCF15Q12870 199 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 DRP2Q13474 957 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 KCNC3Q14003 757 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 PTPN21Q16825 1174 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 MTERF2Q49AM1 385 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 CLLU1OSQ5K130 101 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 LRCH2Q5VUJ6 765 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 TWF2Q6IBS0 349 aaKnown RBP4.51□□□□□ -1.69
MDM1-215ENST00000545964 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 FDX2Q6P4F2 183 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 BLOC1S2Q6QNY1 142 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 TMC5Q6UXY8 1006 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 FAM43BQ6ZT52 329 aaPredicted RBP4.51□□□□□ -1.69
MDM1-215ENST00000545964 CATSPER4Q7RTX7 472 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 MIER3Q7Z3K6 550 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 ATG4DQ86TL0 474 aaPredicted RBP4.51□□□□□ -1.69
MDM1-215ENST00000545964 RHPN2Q8IUC4 686 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 TEX2Q8IWB9 1127 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 SLC39A11Q8N1S5 342 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 LRRC43Q8N309 656 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 GPR152Q8TDT2 470 aa4.51□□□□□ -1.69
MDM1-215ENST00000545964 PIK3R5Q8WYR1 880 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms