RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 CYP26A1O43174 497 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 CD4P01730 458 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 KRT8P05787 483 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 PRUNE1Q86TP1 453 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 TEX13BQ9BXU2 312 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 TRABDQ9H4I3 376 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 SLC38A7Q9NVC3 462 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 USP32Q8NFA0 1604 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 PP2D1A8MPX8 630 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 AGTP01019 485 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 PCYT1AP49585 367 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 FOXO4P98177 505 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 DYNC1I2Q13409 638 aaKnown RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 MTMR2Q13614 643 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 COG2Q14746 738 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 SGSM1Q2NKQ1 1148 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 SPDYAQ5MJ70 313 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 TRAPPC11Q7Z392 1133 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 NEK2P51955 445 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 EPN3Q9H201 632 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 MAGEB2O15479 319 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 TEX33O43247 280 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 ATP9BO43861 1147 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 XKR3Q5GH77 459 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 PKD2L2Q9NZM6 624 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 LSM7Q9UK45 103 aaKnown RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 DLC1Q96QB1 1528 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 SSU72P8A0A1W2PR75 194 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 APOA1P02647 267 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 SNRNP35Q16560 246 aaKnown RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 KCTD17Q8N5Z5 321 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 VIPAS39Q9H9C1 493 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 PSMC3IPQ9P2W1 217 aaPredicted RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 ARL2BPQ9Y2Y0 163 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 SPAG6O75602 509 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 ARIH2O95376 493 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
CIT-217ENST00000545913 YAF2Q8IY57 180 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
CIT-217ENST00000545913 EIF3DO15371 548 aaKnown RBP eCLIP12.29□□□□□ -0.44
CIT-217ENST00000545913 RALBP11234 206 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 PGM1P36871 562 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 SERPINB9P50453 376 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 GFM2Q969S9 779 aaKnown RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 STAMBPL1Q96FJ0 436 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 PITPNM2Q9BZ72 1349 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 TNPO2O14787 897 aaKnown RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 RAD23BP54727 409 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 STRIP1Q5VSL9 837 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 SRBD1Q8N5C6 995 aaKnown RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 TBX3O15119 743 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 TADA2AO75478 443 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 POTEAQ6S8J7 498 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 RASGRP2Q7LDG7 609 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 TNIP2Q8NFZ5 429 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 GTF3C2Q8WUA4 911 aaPredicted RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 PPP2R3CQ969Q6 453 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 PLA2G12BQ9BX93 195 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 CLCA2Q9UQC9 943 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 A0A1B0GTH6 734 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 SYTL3Q4VX76 610 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 IER5Q5VY09 327 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 PCYOX1LQ8NBM8 494 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 STKLD1Q8NE28 680 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 FAM32AQ9Y421 112 aaKnown RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 ITIH2P19823 946 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 FAM84BQ96KN1 310 aaPredicted RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 TSR3Q9UJK0 312 aaKnown RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 FLT1P17948 1338 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 GOLGA8TH3BQL2 631 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 NDUFS3O75489 264 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 TXNP10599 105 aaKnown RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 ACADSBP45954 432 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 CUL3Q13618 768 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 SNX17Q15036 470 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 LRRC14Q15048 493 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 DNAL1Q4LDG9 190 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 MCEEQ96PE7 176 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 ZNF556Q9HAH1 456 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 RAB6BQ9NRW1 208 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
CIT-217ENST00000545913 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
CIT-217ENST00000545913 PJA2O43164 708 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 C16orf89Q6UX73 402 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 RIBC1Q8N443 379 aaPredicted RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 ZC3H7BQ9UGR2 993 aaKnown RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 TRAF3IP3Q9Y228 551 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 HIST1H2AGP0C0S8 130 aaPredicted RBP12.28□□□□□ -0.44
CIT-217ENST00000545913 HIST1H2ADP20671 130 aa12.28□□□□□ -0.44
CIT-217ENST00000545913 AARS2Q5JTZ9 985 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms