RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	NLRC4	Q9NPP4	1024 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SLC38A7	Q9NVC3	462 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	DPP3	Q9NY33	737 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	APEX2	Q9UBZ4	518 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	DNAJC12	Q9UKB3	198 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ITGA11	Q9UKX5	1188 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LRFN2	Q9ULH4	789 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PCDHB7	Q9Y5E2	793 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TRIM43B	A6NCK2	446 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	EPHB6	O15197	1021 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MEFV	O15553	781 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	NOL4	O94818	638 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	VNN1	O95497	513 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CST3	P01034	146 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ITGB3	P05106	788 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TH	P07101	528 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PFKM	P08237	780 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CYP3A5	P20815	502 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TBXAS1	P24557	533 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MYL6	P60660	151 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RAPGEF1	Q13905	1077 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ZBTB6	Q15916	424 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	HS1BP3	Q53T59	392 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GLRA4	Q5JXX5	417 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MFSD5	Q6N075	450 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PDXDC1	Q6P996	788 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	AGMO	Q6ZNB7	445 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ENOSF1	Q7L5Y1	443 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ZNF598	Q86UK7	904 aa	Known RBP	10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LRRC8A	Q8IWT6	810 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PPM1K	Q8N3J5	372 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	C1orf127	Q8N9H9	656 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TC2N	Q8N9U0	490 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CCDC112	Q8NEF3	446 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LPP	Q93052	612 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PANX2	Q96RD6	677 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GAD1	Q99259	594 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PI4K2A	Q9BTU6	479 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	STK33	Q9BYT3	514 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TMEM161A	Q9NX61	479 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MYO6	Q9UM54	1294 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	AGAP1	Q9UPQ3	857 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	FHOD1	Q9Y613	1164 aa		10.81	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ARL5C	A6NH57	179 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	HOXA2	O43364	376 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	EFCAB14	O75071	495 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CCDC172	P0C7W6	258 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	P4HA1	P13674	534 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ATF7	P17544	494 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	POLR2B	P30876	1174 aa	Known RBP	10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MLH1	P40692	756 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	STAT1	P42224	750 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	NOP14	P78316	857 aa	Known RBP	10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	APBA1	Q02410	837 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GOLGA8F	Q08AF8	430 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GOLGA8DP	Q0D2H9	430 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MYO1E	Q12965	1108 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ZNF699	Q32M78	642 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ZNF667	Q5HYK9	610 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SFMBT2	Q5VUG0	894 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	IQCE	Q6IPM2	695 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PHLDB3	Q6NSJ2	640 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	DPY19L2P1	Q6NXN4	242 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GLB1L	Q6UWU2	654 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ABI1	Q8IZP0	508 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	URGCP	Q8TCY9	931 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LINC01599	Q8WXQ3	324 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	BAP1	Q92560	729 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	FAXDC2	Q96IV6	333 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	FAM84A	Q96KN4	292 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ZMAT2	Q96NC0	199 aa	Known RBP	10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	NAA15	Q9BXJ9	866 aa	Known RBP	10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ABHD10	Q9NUJ1	306 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	KANSL3	Q9P2N6	904 aa		10.8	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LRRC53	A6NM62	1247 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MEIS3P2	A8K0S8	358 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RNF225	M0QZC1	329 aa	Predicted RBP	10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PTGES	O14684	152 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LRRN2	O75325	713 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	OFD1	O75665	1012 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ASS1	P00966	412 aa	Known RBP	10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CSF2RA	P15509	400 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PNPLA4	P41247	253 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SCNN1G	P51170	649 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	YWHAE	P62258	255 aa	Known RBP	10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GCNT1	Q02742	428 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GRIK3	Q13003	919 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PPIG	Q13427	754 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ARID5B	Q14865	1188 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	DRAP1	Q14919	205 aa	Predicted RBP	10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ASIC2	Q16515	512 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ARHGAP44	Q17R89	818 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GJB7	Q6PEY0	223 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	NPAS4	Q8IUM7	802 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ARHGEF19	Q8IW93	802 aa		10.79	□□□□□ -0.68
NPIPA1-208	ENST00000545831	C7orf61	Q8IZ16	206 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms