RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PCDHB2Q9Y5E7 798 aa8.5□□□□□ -1.05
SNHG1-223ENST00000545440 C5orf42Q9H799 3197 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 ARHGEF35A5YM69 484 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 H3BQV1 296 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 INO80B-WBP1J3KQ70 363 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 FSCN2O14926 492 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 CSPG5O95196 566 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 RARAP10276 462 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 FGFR3P22607 806 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 IRS1P35568 1242 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 LTBRP36941 435 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 ATP2C1P98194 919 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 NCBP1Q09161 790 aaKnown RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 PCSK7Q16549 785 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 UBXN11Q5T124 520 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 CDCA2Q69YH5 1023 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 MCTP1Q6DN14 999 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 ADGRD2Q7Z7M1 963 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 SLC39A11Q8N1S5 342 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 EFHBQ8N7U6 833 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 CNNM3Q8NE01 707 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 FBF1Q8TES7 1133 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 MRPS27Q92552 414 aaKnown RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 LPPQ93052 612 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 ABHD17AQ96GS6 310 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 NECAB3Q96P71 396 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 CDCA3Q99618 268 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 RSAD1Q9HA92 442 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 TBC1D13Q9NVG8 400 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 SPG21Q9NZD8 308 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 LRWD1Q9UFC0 647 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 PUF60Q9UHX1 559 aaKnown RBP8.49□□□□□ -1.05
SNHG1-223ENST00000545440 SMC3Q9UQE7 1217 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 MYO10Q9HD67 2058 aa8.49□□□□□ -1.05
SNHG1-223ENST00000545440 TCHHQ07283 1943 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 LRRIQ4A6NIV6 560 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 MEIS3P2A8K0S8 358 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 H3BQ06 376 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 INPPL1O15357 1258 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 EFSO43281 561 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 BNIP3LO60238 219 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 ZC3H11AO75152 810 aaKnown RBP eCLIP8.48□□□□□ -1.051e-6■■□□□ 11.7
SNHG1-223ENST00000545440 PRPF40AO75400 957 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 OFD1O75665 1012 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 IL9P15248 144 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 ARF4P18085 180 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 CYP11B2P19099 503 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 NCLP19338 710 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 CCT6AP40227 531 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 PBX3P40426 434 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 ALDH7A1P49419 539 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 NDUFV1P49821 464 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 BCAR1P56945 870 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 KRT17Q04695 432 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 SPEM2Q0P670 501 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 SFSWAPQ12872 951 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 SMAD4Q13485 552 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 CUL4AQ13619 759 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 FAM187BQ17R55 369 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 NOMO2Q5JPE7 1267 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 AGMOQ6ZNB7 445 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 MRPL10Q7Z7H8 261 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 ZBTB8OSQ8IWT0 167 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 NPAS3Q8IXF0 933 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 HACE1Q8IYU2 909 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 VWA5B2Q8N398 1253 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 URGCPQ8TCY9 931 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 TMEM169Q96HH4 297 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 FRMD6Q96NE9 622 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 TCF25Q9BQ70 676 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 BACH2Q9BYV9 841 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 C2orf40Q9H1Z8 148 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 BHMT2Q9H2M3 363 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 NGRNQ9NPE2 291 aaKnown RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 UBN1Q9NPG3 1134 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 GPRC5CQ9NQ84 441 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 ENTPD7Q9NQZ7 604 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 KANSL3Q9P2N6 904 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 PRKAG3Q9UGI9 489 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 IPPQ9Y573 584 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.48□□□□□ -1.05
SNHG1-223ENST00000545440 KCNMB2Q9Y691 235 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 DOCK8Q8NF50 2099 aa8.48□□□□□ -1.05
SNHG1-223ENST00000545440 A0A087WWV3 80 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 LINC01565O15544 149 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 TNFRSF21O75509 655 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 GLP2RO95838 553 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 SRGAP2BP0DMP2 458 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 BMP4P12644 408 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 CES1P23141 567 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 GTF2F1P35269 517 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 NAMPTP43490 491 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 NRIP1P48552 1158 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 ERVFC1P60507 584 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 RNASELQ05823 741 aaKnown RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 DLX2Q07687 328 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-223ENST00000545440 COASYQ13057 564 aa8.47□□□□□ -1.05
SNHG1-223ENST00000545440 ADAM15Q13444 863 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms