RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 GDI1P31150 447 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ELF1P32519 619 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 CCR2P41597 374 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 BRCC3P46736 316 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ARPP19P56211 112 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 SATB1Q01826 763 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ROR1Q01973 937 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 DMWDQ09019 674 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 SRSF5Q13243 272 aaKnown RBP12.67□□□□□ -0.38
TMEM258-208ENST00000545210 SIM2Q14190 667 aaPredicted RBP12.67□□□□□ -0.38
TMEM258-208ENST00000545210 CSRP2Q16527 193 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 CALCRLQ16602 461 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 UPP1Q16831 310 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 VITQ6UXI7 678 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.67□□□□□ -0.38
TMEM258-208ENST00000545210 MAP4K3Q8IVH8 894 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 IRF7Q92985 503 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ZSWIM3Q96MP5 696 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
TMEM258-208ENST00000545210 IER2Q9BTL4 223 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ZNF334Q9HCZ1 680 aaPredicted RBP12.67□□□□□ -0.38
TMEM258-208ENST00000545210 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 WDR27A2RRH5 827 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 CHURC1-FNTBB4DL54 471 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 HRO43593 1189 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 TRAPPC3O43617 180 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 ABLIM3O94929 683 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 PRKCBP05771 671 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 PSMC3P17980 439 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 VIPR2P41587 438 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 TXKP42681 527 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 CXCL12P48061 93 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 FNTBP49356 437 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 NR5A1Q13285 461 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 MAPK6Q16659 721 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 SLC8B1Q6J4K2 584 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 MCPH1Q8NEM0 835 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 BSNDQ8WZ55 320 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 CCDC113Q9H0I3 377 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 C2orf40Q9H1Z8 148 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 CYP4F11Q9HBI6 524 aa12.66□□□□□ -0.38
TMEM258-208ENST00000545210 ANK1P16157 1881 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 ACKR2O00590 384 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 ZNF197O14709 1029 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 CDKL5O76039 1030 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 SEC24AO95486 1093 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 CHRNB1P11230 501 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 XRCC6P12956 609 aaKnown RBP eCLIP12.65□□□□□ -0.38
TMEM258-208ENST00000545210 ATF2P15336 505 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 CCNE1P24864 410 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 SCRN1Q12765 414 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 GAS6Q14393 721 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
TMEM258-208ENST00000545210 PDZD4Q76G19 769 aaPredicted RBP12.65□□□□□ -0.38
TMEM258-208ENST00000545210 TCEAL8Q8IYN2 117 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 SMARCD2Q92925 531 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 UROC1Q96N76 676 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 TRPV5Q9NQA5 729 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
TMEM258-208ENST00000545210 INSL5Q9Y5Q6 135 aa12.65□□□□□ -0.38
TMEM258-208ENST00000545210 NCANO14594 1321 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 STK36Q9NRP7 1315 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 MYH11P35749 1972 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 SMIM28A0A1B0GU29 152 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 WNT7AO00755 349 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 ZNF263O14978 683 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 MICAL2O94851 1124 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 REC8O95072 547 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 SPATA31C1P0DKV0 1188 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 GJA1P17302 382 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-208ENST00000545210 DCAF4L1Q3SXM0 396 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 CYP4A22Q5TCH4 519 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 SPEM1Q8N4L4 309 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 DEPTORQ8TB45 409 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 ZSCAN18Q8TBC5 510 aaPredicted RBP12.64□□□□□ -0.39
TMEM258-208ENST00000545210 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 KIFC3Q9BVG8 833 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 RBM12Q9NTZ6 932 aaKnown RBP12.64□□□□□ -0.39
TMEM258-208ENST00000545210 ANGPTL2Q9UKU9 493 aa12.64□□□□□ -0.39
TMEM258-208ENST00000545210 ATG2BQ96BY7 2078 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 K7ESF4 209 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 ARNTLO00327 626 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 NEMFO60524 1076 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 MOSPD3O75425 235 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 MYL4P12829 197 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 KRT2P35908 639 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 NAMPTP43490 491 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 PTGDRQ13258 359 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 NT5DC1Q5TFE4 455 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 ATF7IP2Q5U623 682 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 IL31Q6EBC2 164 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 IQCEQ6IPM2 695 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 Q6ZS52 159 aa12.63□□□□□ -0.39
TMEM258-208ENST00000545210 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-208ENST00000545210 LONP2Q86WA8 852 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms