RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 OGTO15294 1046 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 CALUO43852 315 aaPredicted RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 OFD1O75665 1012 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 GARTP22102 1010 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 AKAP5P24588 427 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 RPL13P26373 211 aaKnown RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 PMLP29590 882 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 BMPR1AP36894 532 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 GRM5P41594 1212 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 SHC2P98077 582 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 POU5F1Q01860 360 aaKnown RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 PPP2R3AQ06190 1150 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 MCL1Q07820 350 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 KCNB1Q14721 858 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 SURF1Q15526 300 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 TCTN1Q2MV58 587 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 KMT5BQ4FZB7 885 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 ZC2HC1CQ53FD0 456 aaPredicted RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 ARMCX5Q6P1M9 558 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 RBM23Q86U06 439 aaKnown RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 EFHBQ8N7U6 833 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 MICAL1Q8TDZ2 1067 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 NOC3LQ8WTT2 800 aaKnown RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 LINC01599Q8WXQ3 324 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 ZNF689Q96CS4 500 aaPredicted RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 TMEM169Q96HH4 297 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 TSG101Q99816 390 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 EIF2AQ9BY44 585 aaKnown RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 SLC39A2Q9NP94 309 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 TYW1Q9NV66 732 aaKnown RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 SNTG2Q9NY99 539 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 SPG21Q9NZD8 308 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 FBXL21Q9UKT6 434 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 AGO2Q9UKV8 859 aaKnown RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 FAN1Q9Y2M0 1017 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 NR2E1Q9Y466 385 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 USP9XQ93008 2570 aaPredicted RBP10.35□□□□□ -0.75
CIT-216ENST00000544872 ZMYM2Q9UBW7 1377 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 MYO10Q9HD67 2058 aa10.35□□□□□ -0.75
CIT-216ENST00000544872 TRAPPC3O43617 180 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 ZC3H11AO75152 810 aaKnown RBP eCLIP10.34□□□□□ -0.75
CIT-216ENST00000544872 PRPF6O94906 941 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 PIGRP01833 764 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 MLH1P40692 756 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 NRIP1P48552 1158 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 OSTNP61366 133 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 UBE3AQ05086 875 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 GRIK3Q13003 919 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 KNOP1Q1ED39 458 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 UBXN11Q5T124 520 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 PDE12Q6L8Q7 609 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 ZNF598Q86UK7 904 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 CDR2LQ86X02 465 aaPredicted RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 GRAMD1CQ8IYS0 662 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 ZNF507Q8TCN5 953 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 NETO1Q8TDF5 533 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 CACTINQ8WUQ7 758 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 LPPQ93052 612 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 DDX27Q96GQ7 796 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 UROC1Q96N76 676 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 CASD1Q96PB1 797 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 GAD1Q99259 594 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 HNRNPABQ99729 332 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 TMEM175Q9BSA9 504 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 CDT1Q9H211 546 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 GOLPH3LQ9H4A5 285 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 NXF3Q9H4D5 531 aaKnown RBP10.34□□□□□ -0.75
CIT-216ENST00000544872 SSX2IPQ9Y2D8 614 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 FRMD4BQ9Y2L6 1034 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 TANC1Q9C0D5 1861 aa10.34□□□□□ -0.75
CIT-216ENST00000544872 IGF2RP11717 2491 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 A0A0B4J269 797 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 ARHGEF37A1IGU5 675 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 FSD2A1L4K1 749 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 ZNF233A6NK53 670 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 SRRM3A6NNA2 597 aaPredicted RBP10.33□□□□□ -0.76
CIT-216ENST00000544872 PSMA7O14818 248 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 SLC30A4O14863 429 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 TADA2AO75478 443 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 RECQL4O94761 1208 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 RHOBTB3O94955 611 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 IL18RAPO95256 599 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 POMCP01189 267 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 SP9P0CG40 484 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 MYBP10242 640 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 PAX3P23760 479 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 OR1G1P47890 313 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 DPYDQ12882 1025 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 SNW1Q13573 536 aaKnown RBP10.33□□□□□ -0.76
CIT-216ENST00000544872 N4BP2L1Q5TBK1 243 aaPredicted RBP10.33□□□□□ -0.76
CIT-216ENST00000544872 KIAA1841Q6NSI8 718 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 ELMSAN1Q6PJG2 1045 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 KCNT2Q6UVM3 1135 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 AGMOQ6ZNB7 445 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 NELFCDQ8IXH7 590 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 SMG8Q8ND04 991 aaKnown RBP10.33□□□□□ -0.76
CIT-216ENST00000544872 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
CIT-216ENST00000544872 BEST2Q8NFU1 509 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms