RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 IQCA1Q86XH1 822 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 IL22RA1Q8N6P7 574 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 PHC3Q8NDX5 983 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 IL31RAQ8NI17 732 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 ESR2Q92731 530 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 RHOVQ96L33 236 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 TMEM74Q96NL1 305 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 KLHL5Q96PQ7 755 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 MYL10Q9BUA6 226 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 DDX23Q9BUQ8 820 aaKnown RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 FOXQ1Q9C009 403 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 SOX17Q9H6I2 414 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 AZI2Q9H6S1 392 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 PARD6AQ9NPB6 346 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 PRMT8Q9NR22 394 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 GPN3Q9UHW5 284 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 MKL2Q9ULH7 1088 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 ST3GAL5Q9UNP4 418 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 GINS2Q9Y248 185 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 SSX2IPQ9Y2D8 614 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 MRPS17Q9Y2R5 130 aaKnown RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 PPME1Q9Y570 386 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 ZFP37Q9Y6Q3 630 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-220ENST00000544550 SPTBN4Q9H254 2564 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 FRMPD4Q14CM0 1322 aa4.66□□□□□ -1.66
SNHG1-220ENST00000544550 GVINP1Q7Z2Y8 2422 aa4.65□□□□□ -1.66
SNHG1-220ENST00000544550 SCO2A0A1W2PP80 73 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 FAM170BA6NMN3 283 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ANHXE9PGG2 379 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ZBTB5O15062 677 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 MAFGO15525 162 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 N4BP1O75113 896 aaKnown RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 LAMP2P13473 410 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 HOXB4P17483 251 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 BMP6P22004 513 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 NME2P22392 152 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 KLRC2P26717 231 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 HOXA13P31271 388 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 CNR2P34972 360 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 PBX3P40426 434 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 SLC26A2P50443 739 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 METAP2P50579 478 aaKnown RBP eCLIP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 CLCN4P51793 760 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 CRYBB1P53674 252 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 BCAR1P56945 870 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 MRPS9P82933 396 aaKnown RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 SNW1Q13573 536 aaKnown RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ALX1Q15699 326 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 TMEM266Q2M3C6 531 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 AASDHQ4L235 1098 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ZBTB41Q5SVQ8 909 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 PCNX4Q63HM2 1172 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 MTHFD1LQ6UB35 978 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 AGMOQ6ZNB7 445 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 LRRC55Q6ZSA7 311 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 MFSD6Q6ZSS7 791 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 MTSS1LQ765P7 747 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 RSAD2Q8WXG1 361 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 PHKBQ93100 1093 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 GPRASP2Q96D09 838 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 SEC62Q99442 399 aaKnown RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 CPVLQ9H3G5 476 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 BCAS3Q9H6U6 928 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 JMJD4Q9H9V9 463 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 VAT1LQ9HCJ6 419 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 LTB4R2Q9NPC1 389 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 RTEL1Q9NZ71 1219 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ANKFY1Q9P2R3 1169 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ADAMTS1Q9UHI8 967 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 NOC2LQ9Y3T9 749 aaKnown RBP4.65□□□□□ -1.67
SNHG1-220ENST00000544550 NUMBLQ9Y6R0 609 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 ZMYM6O95789 1325 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 TTC41PQ6P2S7 1318 aa4.65□□□□□ -1.67
SNHG1-220ENST00000544550 NCOR2Q9Y618 2525 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 TTC3P53804 2025 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 CCDC195A0A1B0GUA6 201 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 GSTTP1A0A1W2PQM5 241 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 C1QTNF9BB2RNN3 333 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 TAF4O00268 1085 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 TM4SF5O14894 197 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 INPPL1O15357 1258 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 ZC3H11AO75152 810 aaKnown RBP eCLIP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 C1RP00736 705 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 C1QTNF9P0C862 333 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 NID1P14543 1247 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 TFE3P19532 575 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 GARTP22102 1010 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 EIF4A3P38919 411 aaKnown RBP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 CCR3P51677 355 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 RING1Q06587 406 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 HTR4Q13639 388 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 SIM2Q14190 667 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 PLCB4Q15147 1175 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 SLC44A4Q53GD3 710 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 HGSNATQ68CP4 663 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF852Q6ZMS4 543 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 PRR23BQ6ZRT6 265 aa4.64□□□□□ -1.67
SNHG1-220ENST00000544550 GET4Q7L5D6 327 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-220ENST00000544550 PLPPR4Q7Z2D5 763 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms