RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 GBP4Q96PP9 640 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 ENTPD7Q9NQZ7 604 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 RBAKQ9NYW8 714 aaPredicted RBP20.76■□□□□ 0.91
DDX55-211ENST00000544429 SCN1AP35498 2009 aa20.76■□□□□ 0.91
DDX55-211ENST00000544429 SF3B1O75533 1304 aaKnown RBP eCLIP20.76■□□□□ 0.913e-6■■■■■ 88.4
DDX55-211ENST00000544429 PODXLO00592 558 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 CLIC2O15247 247 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 NCK2O43639 380 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 TADA2AO75478 443 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 B3GAT3O94766 335 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 DSG1Q02413 1049 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 MYBPC2Q14324 1141 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 TMEM132DQ14C87 1099 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 ZCWPW2Q504Y3 356 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 MICAL1Q8TDZ2 1067 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 PPM1EQ8WY54 764 aa20.75■□□□□ 0.91
DDX55-211ENST00000544429 PABPC5Q96DU9 382 aaKnown RBP20.75■□□□□ 0.91
DDX55-211ENST00000544429 CDCA3Q99618 268 aaPredicted RBP20.75■□□□□ 0.91
DDX55-211ENST00000544429 ANO9A1A5B4 782 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 ZNF233A6NK53 670 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 XPOTO43592 962 aaKnown RBP20.74■□□□□ 0.91
DDX55-211ENST00000544429 CSPG5O95196 566 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 KIF20AO95235 890 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 CXCL14O95715 111 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 GTF2F1P35269 517 aaKnown RBP eCLIP20.74■□□□□ 0.91
DDX55-211ENST00000544429 AARSP49588 968 aaKnown RBP eCLIP20.74■□□□□ 0.91
DDX55-211ENST00000544429 SNRNP35Q16560 246 aaKnown RBP20.74■□□□□ 0.91
DDX55-211ENST00000544429 SMYD4Q8IYR2 804 aaPredicted RBP20.74■□□□□ 0.91
DDX55-211ENST00000544429 EFHBQ8N7U6 833 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 XXYLT1Q8NBI6 393 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 CXorf38Q8TB03 319 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 HASPINQ8TF76 798 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 AUTS2Q8WXX7 1259 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 PPP2R3CQ969Q6 453 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 FAM212AQ96EL1 285 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 GTPBP4Q9BZE4 634 aaKnown RBP20.74■□□□□ 0.91
DDX55-211ENST00000544429 GZF1Q9H116 711 aaPredicted RBP20.74■□□□□ 0.91
DDX55-211ENST00000544429 RXFP1Q9HBX9 757 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 PRDM6Q9NQX0 595 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 MAN1B1Q9UKM7 699 aa20.74■□□□□ 0.91
DDX55-211ENST00000544429 GLP2RO95838 553 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 BMP6P22004 513 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 FGFR3P22607 806 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 LTBRP36941 435 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 PRCPP42785 496 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 NRIP1P48552 1158 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 GLUD2P49448 558 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 GUCY2FP51841 1108 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 ELAVL2Q12926 359 aaKnown RBP20.73■□□□□ 0.91
DDX55-211ENST00000544429 ADAM15Q13444 863 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 USP41Q3LFD5 358 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 TMEM184AQ6ZMB5 413 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 VN1R2Q8NFZ6 395 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 TLE6Q9H808 572 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 PDE11AQ9HCR9 933 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 COG5Q9UP83 839 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 MAPK8IP1Q9UQF2 711 aa20.73■□□□□ 0.91
DDX55-211ENST00000544429 FSD2A1L4K1 749 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 PIRO00625 290 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 CYP2J2P51589 502 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 MORC3Q14149 939 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 BMS1Q14692 1282 aaKnown RBP20.72■□□□□ 0.91
DDX55-211ENST00000544429 RTP2Q5QGT7 225 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.72■□□□□ 0.91
DDX55-211ENST00000544429 BEST2Q8NFU1 509 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 B3GALT6Q96L58 329 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 MFSD14AQ96MC6 490 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 MRPL17Q9NRX2 175 aaKnown RBP20.72■□□□□ 0.91
DDX55-211ENST00000544429 SSX2IPQ9Y2D8 614 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 PLXNA3P51805 1871 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 PTPRJQ12913 1337 aa20.72■□□□□ 0.91
DDX55-211ENST00000544429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.71■□□□□ 0.91
DDX55-211ENST00000544429 PER2O15055 1255 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 LINC01565O15544 149 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 NR3C1P04150 777 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 URODP06132 367 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 CNPP09543 421 aaKnown RBP20.71■□□□□ 0.91
DDX55-211ENST00000544429 BRCC3P46736 316 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 MCCD1P59942 119 aaPredicted RBP20.71■□□□□ 0.91
DDX55-211ENST00000544429 CYP24A1Q07973 514 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 PSMD6Q15008 389 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 SURF1Q15526 300 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 FAM171A1Q5VUB5 890 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 C9orf57Q5W0N0 161 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 CENPPQ6IPU0 288 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 RBM23Q86U06 439 aaKnown RBP20.71■□□□□ 0.91
DDX55-211ENST00000544429 ADSSL1Q8N142 457 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 PIK3R5Q8WYR1 880 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 HLA-CQ95604 372 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 SUSD3Q96L08 255 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 TTPALQ9BTX7 342 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 UBE2ZQ9H832 354 aaPredicted RBP20.71■□□□□ 0.91
DDX55-211ENST00000544429 DPP3Q9NY33 737 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 TSC2P49815 1807 aa20.71■□□□□ 0.91
DDX55-211ENST00000544429 MTCL1Q9Y4B5 1905 aaKnown RBP20.7■□□□□ 0.91
DDX55-211ENST00000544429 M0QZQ0 153 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 PPEF2O14830 753 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 TRAPPC3O43617 180 aa20.7■□□□□ 0.9
DDX55-211ENST00000544429 CLASP2O75122 1294 aaKnown RBP20.7■□□□□ 0.9
DDX55-211ENST00000544429 TBX10O75333 385 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms