RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 QARSP47897 775 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 PTPRN2Q92932 1015 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 TRPC7Q9HCX4 862 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 AGO2Q9UKV8 859 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 PZPP20742 1482 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 IGF2BP3O00425 579 aaKnown RBP eCLIP16.22■□□□□ 0.19
CHD4-210ENST00000544040 HDDC2Q7Z4H3 204 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 DDX53Q86TM3 631 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 ADGRF4Q8IZF3 695 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 SLC25A41Q8N5S1 370 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 SHCBP1LQ9BZQ2 653 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 SYNDIG1Q9H7V2 258 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 CAAP1Q9H8G2 361 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 SMG5Q9UPR3 1016 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 ZBTB39O15060 712 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 TSC22D2O75157 780 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 NLRP11P59045 1033 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 DEFA1P59665 94 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 DEFA3P59666 94 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 HEATR4Q86WZ0 1026 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 SCFD1Q8WVM8 642 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 XPO6Q96QU8 1125 aaKnown RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 RERGLQ9H628 205 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 CD248Q9HCU0 757 aa16.22■□□□□ 0.19
CHD4-210ENST00000544040 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 PSMC3IPQ9P2W1 217 aaPredicted RBP16.22■□□□□ 0.19
CHD4-210ENST00000544040 P4HBP07237 508 aaKnown RBP16.21■□□□□ 0.19
CHD4-210ENST00000544040 CRKP46108 304 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 CYLC2Q14093 348 aaPredicted RBP16.21■□□□□ 0.19
CHD4-210ENST00000544040 TBC1D22BQ9NU19 505 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 TJP2Q9UDY2 1190 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 GNAT1P11488 350 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
CHD4-210ENST00000544040 FUT11Q495W5 492 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 FOXP4Q8IVH2 680 aaPredicted RBP16.21■□□□□ 0.19
CHD4-210ENST00000544040 MCEEQ96PE7 176 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 KCNF1Q9H3M0 494 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 DYRK4Q9NR20 520 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 NFKBIL1Q9UBC1 381 aaPredicted RBP16.21■□□□□ 0.19
CHD4-210ENST00000544040 PKP3Q9Y446 797 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 PRDX5P30044 214 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 ELMSAN1Q6PJG2 1045 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 CCDC60Q8IWA6 550 aaPredicted RBP16.21■□□□□ 0.19
CHD4-210ENST00000544040 ASAP3Q8TDY4 903 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 ZFP42Q96MM3 310 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 PIDD1Q9HB75 910 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 FEM1BQ9UK73 627 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 ZHX2Q9Y6X8 837 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 INSRP06213 1382 aa16.21■□□□□ 0.19
CHD4-210ENST00000544040 CYP2E1P05181 493 aaPredicted RBP16.21■□□□□ 0.18
CHD4-210ENST00000544040 ARHGEF6Q15052 776 aa16.21■□□□□ 0.18
CHD4-210ENST00000544040 RCOR2Q8IZ40 523 aa16.21■□□□□ 0.18
CHD4-210ENST00000544040 WNK4Q96J92 1243 aa16.21■□□□□ 0.18
CHD4-210ENST00000544040 STK36Q9NRP7 1315 aa16.21■□□□□ 0.18
CHD4-210ENST00000544040 ARHGAP17Q68EM7 881 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 C11orf96Q7Z7L8 435 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 TRIM69Q86WT6 500 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 MICU2Q8IYU8 434 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 SPATA33Q96N06 139 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 KCNK16Q96T55 309 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 RBM12Q9NTZ6 932 aaKnown RBP16.2■□□□□ 0.18
CHD4-210ENST00000544040 ABCC10Q5T3U5 1492 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 FAM47DPA6NHR8 397 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 HIST1H2AGP0C0S8 130 aaPredicted RBP16.2■□□□□ 0.18
CHD4-210ENST00000544040 HIST1H2ADP20671 130 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 CCND1P24385 295 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 SLC16A1P53985 500 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 SEC24CP53992 1094 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 TRADDQ15628 312 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 TRIM72Q6ZMU5 477 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 GIMAP8Q8ND71 665 aaPredicted RBP16.2■□□□□ 0.18
CHD4-210ENST00000544040 HIST1H2AHQ96KK5 128 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 HIST1H2AJQ99878 128 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 H2AFJQ9BTM1 129 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 BLOC1S6Q9UL45 172 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 AKT1P31749 480 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 LUZP2Q86TE4 346 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 DIS3LQ8TF46 1054 aaKnown RBP16.2■□□□□ 0.18
CHD4-210ENST00000544040 HES6Q96HZ4 224 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 SLC40A1Q9NP59 571 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 SCN3BQ9NY72 215 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 PFASO15067 1338 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 A0A1B0GW55 424 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 DUX4L2P0CJ85 424 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 DUX4L3P0CJ86 424 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 DUX4L4P0CJ87 422 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 DUX4L5P0CJ88 424 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 DUX4L6P0CJ89 424 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 DUX4L7P0CJ90 424 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 TARSP26639 723 aaKnown RBP16.2■□□□□ 0.18
CHD4-210ENST00000544040 CAPZA2P47755 286 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 CDK17Q00537 523 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 GRAPQ13588 217 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 IL31Q6EBC2 164 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 GRAPLQ8TC17 118 aaPredicted RBP16.2■□□□□ 0.18
CHD4-210ENST00000544040 SH2D3AQ9BRG2 576 aa16.2■□□□□ 0.18
CHD4-210ENST00000544040 TDRD3Q9H7E2 651 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms