RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BEST2Q8NFU1 509 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 PLEKHO2Q8TD55 490 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 GPR62Q9BZJ7 368 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
CD9-210ENST00000543916 ZBP1Q9H171 429 aa16.36■□□□□ 0.21
CD9-210ENST00000543916 PUF60Q9UHX1 559 aaKnown RBP16.36■□□□□ 0.21
CD9-210ENST00000543916 PSMA7O14818 248 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 PPEF2O14830 753 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 XPOTO43592 962 aaKnown RBP16.35■□□□□ 0.21
CD9-210ENST00000543916 TADA2AO75478 443 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 B3GAT3O94766 335 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 CCNE1P24864 410 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 RPL9P32969 192 aaKnown RBP16.35■□□□□ 0.21
CD9-210ENST00000543916 STIM1Q13586 685 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 PSMD6Q15008 389 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 EDRF1Q3B7T1 1238 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 PLPP4Q5VZY2 271 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
CD9-210ENST00000543916 KLHL10Q6JEL2 608 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 FUT10Q6P4F1 479 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 DCLRE1AQ6PJP8 1040 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 VPS52Q8N1B4 723 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 AUTS2Q8WXX7 1259 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 DDX27Q96GQ7 796 aaKnown RBP16.35■□□□□ 0.21
CD9-210ENST00000543916 DHTKD1Q96HY7 919 aaPredicted RBP16.35■□□□□ 0.21
CD9-210ENST00000543916 MFSD14AQ96MC6 490 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 TCF25Q9BQ70 676 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 HERC2P3Q9BVR0 1158 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 ENTPD7Q9NQZ7 604 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 STXBP5LQ9Y2K9 1186 aa16.35■□□□□ 0.21
CD9-210ENST00000543916 MYO9BQ13459 2157 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 TSC2P49815 1807 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 SOD2P04179 222 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 PPP1R2P41236 205 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 BRCC3P46736 316 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 TFAMQ00059 246 aaKnown RBP16.34■□□□□ 0.21
CD9-210ENST00000543916 CEP135Q66GS9 1140 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
CD9-210ENST00000543916 TMC7Q7Z402 723 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 ADGRD2Q7Z7M1 963 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 NT5DC4Q86YG4 428 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 ZC3H3Q8IXZ2 948 aaKnown RBP16.34■□□□□ 0.21
CD9-210ENST00000543916 OR5B17Q8NGF7 314 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 EEF2KMTQ96G04 330 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 B3GALT6Q96L58 329 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 CGRRF1Q99675 332 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 TSG101Q99816 390 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 DPP3Q9NY33 737 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 TMEM63CQ9P1W3 806 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 CTNND2Q9UQB3 1225 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 SF3B1O75533 1304 aaKnown RBP eCLIP16.34■□□□□ 0.21
CD9-210ENST00000543916 EYSQ5T1H1 3165 aa16.34■□□□□ 0.21
CD9-210ENST00000543916 ANO9A1A5B4 782 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 HIDE1A8MVS5 230 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 I3L4J1 428 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 AKAP3O75969 853 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 CTSAP10619 480 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
CD9-210ENST00000543916 LRRC63Q05C16 580 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 ADAM9Q13443 819 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 SURF1Q15526 300 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 CCDC85BQ15834 202 aaPredicted RBP16.33■□□□□ 0.2
CD9-210ENST00000543916 TIGD5Q53EQ6 642 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 TCEAL5Q5H9L2 206 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 CCDC183Q5T5S1 534 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 C9orf57Q5W0N0 161 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 SCARA3Q6AZY7 606 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 TTI2Q6NXR4 508 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 WDR49Q8IV35 697 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 C1orf127Q8N9H9 656 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 MICAL1Q8TDZ2 1067 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 CCDC127Q96BQ5 260 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
CD9-210ENST00000543916 DUSP9Q99956 384 aaKnown RBP16.33■□□□□ 0.2
CD9-210ENST00000543916 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 NSUN3Q9H649 340 aaKnown RBP16.33■□□□□ 0.2
CD9-210ENST00000543916 INTS13Q9NVM9 706 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 FRMD4BQ9Y2L6 1034 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.33■□□□□ 0.2
CD9-210ENST00000543916 SCN1AP35498 2009 aa16.33■□□□□ 0.2
CD9-210ENST00000543916 PIRO00625 290 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 MAPK13O15264 365 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 TMEM191BP0C7N4 346 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 DLATP10515 647 aaKnown RBP16.32■□□□□ 0.2
CD9-210ENST00000543916 STX17P56962 302 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
CD9-210ENST00000543916 PTPN14Q15678 1187 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 DPCR1Q3MIW9 517 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 PRRC2BQ5JSZ5 2229 aaKnown RBP16.32■□□□□ 0.2
CD9-210ENST00000543916 PDE12Q6L8Q7 609 aaKnown RBP16.32■□□□□ 0.2
CD9-210ENST00000543916 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 MAFAQ8NHW3 353 aaPredicted RBP16.32■□□□□ 0.2
CD9-210ENST00000543916 CXorf38Q8TB03 319 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 PPM1EQ8WY54 764 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 ZNF516Q92618 1163 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 NGRNQ9NPE2 291 aaKnown RBP16.32■□□□□ 0.2
CD9-210ENST00000543916 CHST7Q9NS84 486 aa16.32■□□□□ 0.2
CD9-210ENST00000543916 STK39Q9UEW8 545 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms