RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 RGS9BPQ6ZS82 235 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 C4orf33Q8N1A6 199 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 CCDC89Q8N998 374 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 DENND1AQ8TEH3 1009 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 CFAP57Q96MR6 1250 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 HERPUD2Q9BSE4 406 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 SCOCQ9UIL1 159 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 R3HDM2Q9Y2K5 976 aaKnown RBP13.32□□□□□ -0.28
SMCR5-201ENST00000543475 SPATA31A5Q5VU36 1347 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 SPATA31A7Q8IWB4 1347 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 P4HA2O15460 535 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 PRPF4O43172 522 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMCR5-201ENST00000543475 MUTP22033 750 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 CIITAP33076 1130 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 RPA3P35244 121 aaPredicted RBP13.32□□□□□ -0.28
SMCR5-201ENST00000543475 KHDC1Q4VXA5 237 aaKnown RBP13.32□□□□□ -0.28
SMCR5-201ENST00000543475 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 HHATQ5VTY9 493 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 FAM118BQ9BPY3 351 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 KIAA1586Q9HCI6 787 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 GRID1Q9ULK0 1009 aa13.32□□□□□ -0.28
SMCR5-201ENST00000543475 SMG5Q9UPR3 1016 aaKnown RBP13.32□□□□□ -0.28
SMCR5-201ENST00000543475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMCR5-201ENST00000543475 ZNFX1Q9P2E3 1918 aaKnown RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 GCLCP48506 637 aaPredicted RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 IKQ13123 557 aaPredicted RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 RCN2Q14257 317 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 SLC45A4Q5BKX6 768 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 FYB2Q5VWT5 728 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 C4orf50Q6ZRC1 276 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 NLRP9Q7RTR0 991 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 FBXO11Q86XK2 927 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 NPHS2Q9NP85 383 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 LRCH1Q9Y2L9 728 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 TISP43B9A030 160 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 K7ENM7 598 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 ABHD2P08910 425 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 SKIP12755 728 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 MXI1P50539 228 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 TRAF1Q13077 416 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 PKN2Q16513 984 aaKnown RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 RFWD3Q6PCD5 774 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 GSTA5Q7RTV2 222 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 MTDHQ86UE4 582 aaKnown RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 RELL1Q8IUW5 271 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 FAM136AQ96C01 138 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 PPP1R12CQ9BZL4 782 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 LNPEPQ9UIQ6 1025 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 HNRNPCL1O60812 293 aaKnown RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 RTN3O95197 1032 aaPredicted RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 CYP11B1P15538 503 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 RPS6KA3P51812 740 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 MFAP3P55082 362 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 CENPCQ03188 943 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 MYBPC2Q14324 1141 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 RCN1Q15293 331 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 SPDYAQ5MJ70 313 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 PPP1R15BQ5SWA1 713 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 OTOAQ7RTW8 1153 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 DCAF4Q8WV16 495 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 MRRFQ96E11 262 aaKnown RBP13.31□□□□□ -0.28
SMCR5-201ENST00000543475 TRIM4Q9C037 500 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 TLE6Q9H808 572 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 WDR35Q9P2L0 1181 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 GGA1Q9UJY5 639 aa13.31□□□□□ -0.28
SMCR5-201ENST00000543475 FAM196BA6NMK8 535 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 SLC1A5Q15758 541 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 P3H1Q32P28 736 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 CLNKQ7Z7G1 428 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 ZFAND2BQ8WV99 257 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMCR5-201ENST00000543475 SENP1Q9P0U3 644 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 COL24A1Q17RW2 1714 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 C2CD2LO14523 706 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 ECE2O60344 883 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 HLA-DOAP06340 250 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 RALAP11233 206 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 EEF2P13639 858 aaKnown RBP13.3□□□□□ -0.28
SMCR5-201ENST00000543475 GCAP28676 217 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 SLC18A1P54219 525 aa13.3□□□□□ -0.28
SMCR5-201ENST00000543475 POLE2P56282 527 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms