RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ERO1AQ96HE7 468 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 ANKRD36BP1Q96IX9 119 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 ALS2CR12Q96Q35 445 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 OSMRQ99650 979 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 IMPG2Q9BZV3 1241 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 ASB7Q9H672 318 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 APOBEC3GQ9HC16 384 aaKnown RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 SAGE1Q9NXZ1 904 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
GNE-206ENST00000543356 MRFAP1Q9Y605 127 aa10.03□□□□□ -0.8
GNE-206ENST00000543356 FRMPD3Q5JV73 1810 aa10.02□□□□□ -0.8
GNE-206ENST00000543356 CCDC66A2RUB6 948 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 CTIFO43310 598 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 SLU7O95391 586 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 TNFAIP3P21580 790 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 EIF4BP23588 611 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 HOXA11P31270 313 aaPredicted RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 OSTNP61366 133 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 NOP14P78316 857 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 ZNF200P98182 395 aaPredicted RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 SNX17Q15036 470 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 CCSAPQ6IQ19 270 aaPredicted RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 NOTUMQ6P988 496 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 SLC27A1Q6PCB7 646 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 CXCL17Q6UXB2 119 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 NT5DC4Q86YG4 428 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 GLYCTKQ8IVS8 523 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 CD302Q8IX05 232 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 TMEM192Q8IY95 271 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 U2AF1L4Q8WU68 220 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 NOX5Q96PH1 765 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 CDHR5Q9HBB8 845 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.02□□□□□ -0.813e-6■■■■■ 161.5
GNE-206ENST00000543356 MROH7Q68CQ1 1323 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 A0A0A6YYK5 440 aaPredicted RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 CYP26A1O43174 497 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 H2AFZP0C0S5 128 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 ACO1P21399 889 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 USP8P40818 1118 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 PDE6CP51160 858 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 TFAMQ00059 246 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 SGSM1Q2NKQ1 1148 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 NBPF20Q3BBV1 942 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 H2AFVQ71UI9 128 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 NOP9Q86U38 636 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 SLC20A1Q8WUM9 679 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 TAF4BQ92750 862 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 PACSIN1Q9BY11 444 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 DDX20Q9UHI6 824 aaKnown RBP10.02□□□□□ -0.81
GNE-206ENST00000543356 CNTN6Q9UQ52 1028 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 CAPN6Q9Y6Q1 641 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 NCANO14594 1321 aa10.02□□□□□ -0.81
GNE-206ENST00000543356 LACTBL1A8MY62 500 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 MOCS3O95396 460 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 SGPL1O95470 568 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 CYP11B1P15538 503 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 FGFR4P22455 802 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 YY1P25490 414 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 PRMT2P55345 433 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 AMPD2Q01433 879 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 ARHGEF6Q15052 776 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 SLC10A6Q3KNW5 377 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 SPOPLQ6IQ16 392 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 RPAINQ86UA6 219 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
GNE-206ENST00000543356 UBR7Q8N806 425 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 PCSK9Q8NBP7 692 aaKnown RBP10.01□□□□□ -0.81
GNE-206ENST00000543356 RAET1EQ8TD07 263 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 FAXDC2Q96IV6 333 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 ACAP3Q96P50 834 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 SALL4Q9UJQ4 1053 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 C2CD2Q9Y426 696 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 NUB1Q9Y5A7 615 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 NPTXRO95502 500 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 ASGR1P07306 291 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 NFICP08651 508 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 TMEM253P0C7T8 217 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 CHRNB2P17787 502 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 BPIFB4P59827 614 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 MRPS6P82932 125 aaKnown RBP10.01□□□□□ -0.81
GNE-206ENST00000543356 CDR2Q01850 454 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 TRPC3Q13507 836 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 IFI16Q16666 785 aaKnown RBP10.01□□□□□ -0.81
GNE-206ENST00000543356 PAPD7Q5XG87 772 aaKnown RBP10.01□□□□□ -0.81
GNE-206ENST00000543356 JADE1Q6IE81 842 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 GDF6Q6KF10 455 aaPredicted RBP10.01□□□□□ -0.81
GNE-206ENST00000543356 SLC47A2Q86VL8 602 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 ZNF677Q86XU0 584 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 TMEM40Q8WWA1 233 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 ANKRD7Q92527 254 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 NIF3L1Q9GZT8 377 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 PLEKHA5Q9HAU0 1116 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 CDC23Q9UJX2 597 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 GINS2Q9Y248 185 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 DERAQ9Y315 318 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 JRKLQ9Y4A0 524 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 PCDHGC5Q9Y5F6 944 aa10.01□□□□□ -0.81
GNE-206ENST00000543356 PDCD11Q14690 1871 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms