RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CST3P01034 146 aaPredicted RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 CFHP08603 1231 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 COMTP21964 271 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 TBXAS1P24557 533 aaPredicted RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 CARSP49589 748 aaKnown RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 EPHB4P54760 987 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 CENPCQ03188 943 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 NNTQ13423 1086 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 TRADDQ15628 312 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 ATF7IP2Q5U623 682 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 EMBQ6PCB8 327 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 KLHL7Q8IXQ5 586 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 IFT20Q8IY31 132 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 EFCAB13Q8IY85 973 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 MCOLN2Q8IZK6 566 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 ZNF564Q8TBZ8 553 aaPredicted RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 MAML3Q96JK9 1138 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 ZNF668Q96K58 619 aaPredicted RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 RNPC3Q96LT9 517 aaKnown RBP15.18■□□□□ 0.02
LDB3-207ENST00000542786 NLRP4Q96MN2 994 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 GDAP1L1Q96MZ0 367 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 MTMR12Q9C0I1 747 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 CDT1Q9H211 546 aa15.18■□□□□ 0.02
LDB3-207ENST00000542786 AGPSO00116 658 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 KRIT1O00522 736 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 SART1O43290 800 aaKnown RBP15.17■□□□□ 0.02
LDB3-207ENST00000542786 B4GALT4O60513 344 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 CTNNA2P26232 953 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 ECHS1P30084 290 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
LDB3-207ENST00000542786 GUCY2DQ02846 1103 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 FAM110CQ1W6H9 321 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 SMYD5Q6GMV2 418 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 EIF1ADQ8N9N8 165 aaKnown RBP15.17■□□□□ 0.02
LDB3-207ENST00000542786 RBBP8NLQ8NC74 664 aaPredicted RBP15.17■□□□□ 0.02
LDB3-207ENST00000542786 SEC14L1Q92503 715 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 XYLT2Q9H1B5 865 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 SLITRK6Q9H5Y7 841 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 EPB41L5Q9HCM4 733 aa15.17■□□□□ 0.02
LDB3-207ENST00000542786 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 ADCY6O43306 1168 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 FGGP02679 453 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 ZNF286BP0CG31 522 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 SMPD1P17405 629 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 NOMO3P69849 1222 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 SURF1Q15526 300 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 SND1Q7KZF4 910 aaKnown RBP eCLIP15.16■□□□□ 0.02
LDB3-207ENST00000542786 BTBD6Q96KE9 485 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 PARK7Q99497 189 aaKnown RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 DDX47Q9H0S4 455 aaKnown RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 CNOT8Q9UFF9 292 aaKnown RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 MGAMO43451 1857 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 TMEM110-MUSTN1A8MSY1 372 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 INO80B-WBP1J3KQ70 363 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 GPR25O00155 361 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 MAGEB2O15479 319 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 CLSTN1O94985 981 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 SYF2O95926 243 aaKnown RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 FAM153BP0C7A2 387 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 CTNNA1P35221 906 aaKnown RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 MYL6P60660 151 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 PTP4A2Q12974 167 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 PAK2Q13177 524 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 ZNF211Q13398 564 aaPredicted RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 MESDQ14696 234 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 ZNF568Q3ZCX4 644 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 FAM153CQ494X1 144 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 DUSP28Q4G0W2 176 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 TRIM72Q6ZMU5 477 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 TMEM192Q8IY95 271 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 ZDHHC14Q8IZN3 488 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 CEP120Q8N960 986 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 NPLOC4Q8TAT6 608 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 TCHPQ9BT92 498 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 INO80BQ9C086 356 aaPredicted RBP15.16■□□□□ 0.02
LDB3-207ENST00000542786 WNT8AQ9H1J5 351 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 FAM153AQ9UHL3 310 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 PCDHB4Q9Y5E5 795 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 IVNS1ABPQ9Y6Y0 642 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 EVPLQ92817 2033 aa15.16■□□□□ 0.02
LDB3-207ENST00000542786 MROH7Q68CQ1 1323 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 POLR3GO15318 223 aaPredicted RBP15.15■□□□□ 0.02
LDB3-207ENST00000542786 PPFIA4O75335 1185 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 MYBL1P10243 752 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 PHKA2P46019 1235 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 FAM193AP78312 1265 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 DUOXA2Q1HG44 320 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 MARCH8Q5T0T0 291 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 NAA35Q5VZE5 725 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 AADACL2Q6P093 401 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 TMEM270Q6UE05 265 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 PLEKHH3Q7Z736 793 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 CXorf38Q8TB03 319 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 CYFIP2Q96F07 1278 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 NIF3L1Q9GZT8 377 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 PLEKHA4Q9H4M7 779 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 ERVK-5Q9HDB9 667 aa15.15■□□□□ 0.02
LDB3-207ENST00000542786 MED4Q9NPJ6 270 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms