RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 NRP1O14786 923 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 AP5Z1O43299 807 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 VNN1O95497 513 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 POMCP01189 267 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 AFPP02771 609 aaKnown RBP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 GALTP07902 379 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 NFICP08651 508 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 DLATP10515 647 aaKnown RBP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 ATP1A3P13637 1013 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 ATICP31939 592 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 FMO5P49326 533 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 AARSP49588 968 aaKnown RBP eCLIP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 GATMP50440 423 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 COPB1P53618 953 aaKnown RBP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 TPM4P67936 248 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 RBP5P82980 135 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 FANCCQ00597 558 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 TMEM132DQ14C87 1099 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 SGSM1Q2NKQ1 1148 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 LRIT3Q3SXY7 679 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 CBWD6Q4V339 395 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 EPC2Q52LR7 807 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 CBWD3Q5JTY5 395 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 CBWD5Q5RIA9 395 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 SARM1Q6SZW1 724 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 TMCO2Q7Z6W1 182 aaPredicted RBP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 TDHQ8IZJ6 230 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 ABI1Q8IZP0 508 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 LRRC52Q8N7C0 313 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 RNF169Q8NCN4 708 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 BEST2Q8NFU1 509 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 URGCPQ8TCY9 931 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 TAF4BQ92750 862 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 CCDC127Q96BQ5 260 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 FAM212AQ96EL1 285 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 KIF12Q96FN5 646 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 ANKRD36BP1Q96IX9 119 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 NAP1L5Q96NT1 182 aaPredicted RBP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 ERGIC2Q96RQ1 377 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 VPS16Q9H269 839 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 RAB20Q9NX57 234 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 GDAP2Q9NXN4 497 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 MAGEC2Q9UBF1 373 aaPredicted RBP6.34□□□□□ -1.39
ABCF1-207ENST00000542772 SIX4Q9UIU6 781 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 ITGA11Q9UKX5 1188 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 PCDHA11Q9Y5I1 949 aa6.34□□□□□ -1.39
ABCF1-207ENST00000542772 LAMA2P24043 3122 aaKnown RBP6.34□□□□□ -1.4
ABCF1-207ENST00000542772 A0A1W2PQC6 194 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TBKBP1A7MCY6 615 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 GRXCR1A8MXD5 290 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 C5orf67F2Z3F1 127 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TEX33O43247 280 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TLL1O43897 1013 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 B4GALT3O60512 393 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 N4BP1O75113 896 aaKnown RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 ZC3H11AO75152 810 aaKnown RBP eCLIP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 LRRN2O75325 713 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 CAPN15O75808 1086 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 ASS1P00966 412 aaKnown RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TNNC2P02585 160 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 RB1P06400 928 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TMEM191BP0C7N4 346 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TRIM49P0CI25 452 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TRIM49CP0CI26 452 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 IGFBP6P24592 240 aaPredicted RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 PBX1P40424 430 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 PNPLA4P41247 253 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 MTIF2P46199 727 aaKnown RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 GCLMP48507 274 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 CLCNKBP51801 687 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 BCAR1P56945 870 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 LILRA4P59901 499 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 ERVK-21P61565 698 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 SMAD3P84022 425 aaKnown RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TFAMQ00059 246 aaKnown RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 PLCB3Q01970 1234 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 BTG3Q14201 252 aaPredicted RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 HSP90AA4PQ58FG1 418 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 GLRA4Q5JXX5 417 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 TDRD10Q5VZ19 366 aaKnown RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 C9orf57Q5W0N0 161 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 KCNT2Q6UVM3 1135 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 DPH6Q7L8W6 267 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 GPR65Q8IYL9 337 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 RNF168Q8IYW5 571 aaPredicted RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 LRRC43Q8N309 656 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 FIBCD1Q8N539 461 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 RNF214Q8ND24 703 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 FBXL13Q8NEE6 735 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 ANKRD20A12PQ8NF67 263 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 SEMA4DQ92854 862 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 C18orf25Q96B23 403 aaPredicted RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 RNPC3Q96LT9 517 aaKnown RBP6.33□□□□□ -1.4
ABCF1-207ENST00000542772 SAMD11Q96NU1 681 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 RPS6KC1Q96S38 1066 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 PAAF1Q9BRP4 392 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 ZBED2Q9BTP6 218 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 COLEC11Q9BWP8 271 aa6.33□□□□□ -1.4
ABCF1-207ENST00000542772 XYLT2Q9H1B5 865 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms