RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 JAMLQ86YT9 394 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 ATP8B4Q8TF62 1192 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 TATDN2Q93075 761 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 FMO2Q99518 471 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 SH2D3AQ9BRG2 576 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 MSTO1Q9BUK6 570 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 TMEM109Q9BVC6 243 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 IMPG2Q9BZV3 1241 aa10.55□□□□□ -0.72
SS18-205ENST00000542420 ZSCAN5CA6NGD5 496 aaPredicted RBP10.54□□□□□ -0.72
SS18-205ENST00000542420 LRRIQ4A6NIV6 560 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 NDC80O14777 642 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 EIF3HO15372 352 aaKnown RBP eCLIP10.54□□□□□ -0.72
SS18-205ENST00000542420 SPOPO43791 374 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 CNMDO75829 334 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 MYZAPP0CAP1 466 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 DLATP10515 647 aaKnown RBP10.54□□□□□ -0.72
SS18-205ENST00000542420 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
SS18-205ENST00000542420 MCL1Q07820 350 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 CAPSQ13938 189 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 MESDQ14696 234 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 TREML2Q5T2D2 321 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 LRRC31Q6UY01 552 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 MON1BQ7L1V2 547 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 ABRAQ8N0Z2 381 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 GDAP1L1Q96MZ0 367 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 TOPORSQ9NS56 1045 aaPredicted RBP10.54□□□□□ -0.72
SS18-205ENST00000542420 ZDHHC18Q9NUE0 388 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 MTRF1LQ9UGC7 380 aaKnown RBP10.54□□□□□ -0.72
SS18-205ENST00000542420 PLAAQ9Y263 795 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 PASKQ96RG2 1323 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 COL1A2P08123 1366 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 ZNF236Q9UL36 1845 aa10.54□□□□□ -0.72
SS18-205ENST00000542420 ESYT3A0FGR9 886 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 OGTO15294 1046 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 DAPK3O43293 454 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 VNN1O95497 513 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 KRT5P13647 590 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 NSFP46459 744 aaKnown RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 RNASE9P60153 205 aaKnown RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 CNTN2Q02246 1040 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 CAV1Q03135 178 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 SLMAPQ14BN4 828 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 CELF3Q5SZQ8 465 aaKnown RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 SEPT14Q6ZU15 432 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 USP50Q70EL3 339 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 HOOK3Q86VS8 718 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 DNAAF5Q86Y56 855 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 PRELID2Q8N945 189 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 RIN2Q8WYP3 895 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 POP1Q99575 1024 aaKnown RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 PPP1R1BQ9UD71 204 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 SLC45A1Q9Y2W3 748 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 ASB14A6NK59 587 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 FAM189A1O60320 539 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 MSCO60682 206 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 PROSCO94903 275 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 ASS1P00966 412 aaKnown RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 PROZP22891 400 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 MAPK4P31152 587 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 CDH5P33151 784 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 TCF7P36402 384 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 COILP38432 576 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 MAGEA9P43362 315 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 IRAK1P51617 712 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 GUCY2FP51841 1108 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 CDR1P51861 262 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 NOMO3P69849 1222 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 FAM187BQ17R55 369 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 SWT1Q5T5J6 900 aaKnown RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 PLEKHA7Q6IQ23 1121 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 SUGP1Q8IWZ8 645 aaKnown RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 TMEM143Q96AN5 459 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 GPR20Q99678 358 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 ASCC2Q9H1I8 757 aaPredicted RBP10.53□□□□□ -0.72
SS18-205ENST00000542420 SMARCAD1Q9H4L7 1026 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 DONSONQ9NYP3 566 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 WHRNQ9P202 907 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 GGA2Q9UJY4 613 aa10.53□□□□□ -0.72
SS18-205ENST00000542420 CLDN3O15551 220 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 THAP12O43422 761 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 HBP1O60381 514 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 IL18RAPO95256 599 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 CALB1P05937 261 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 ATXN8OSP0DMR3 200 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 SOX10P56693 466 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 NOP14P78316 857 aaKnown RBP10.52□□□□□ -0.72
SS18-205ENST00000542420 SIX1Q15475 284 aaPredicted RBP10.52□□□□□ -0.72
SS18-205ENST00000542420 UAP1Q16222 522 aaPredicted RBP10.52□□□□□ -0.72
SS18-205ENST00000542420 LRRC38Q5VT99 294 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 GADL1Q6ZQY3 521 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 TSHZ1Q6ZSZ6 1077 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 NCAPG2Q86XI2 1143 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 BBOF1Q8ND07 529 aa10.52□□□□□ -0.72
SS18-205ENST00000542420 KRT35Q92764 455 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms