RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 ODR4Q5SWX8 454 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 CCDC127Q96BQ5 260 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 MRPL1Q9BYD6 325 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TRABDQ9H4I3 376 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 POLLQ9UGP5 575 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 MEGF6O75095 1541 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 KRT38O76015 456 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 GFPT2O94808 682 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TRAPPC10P48553 1259 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 GSTA3Q16772 222 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 LIN52Q52LA3 116 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 CDKAL1Q5VV42 579 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TSHZ1Q6ZSZ6 1077 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ATG9AQ7Z3C6 839 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 CROCCP3Q8IVE0 287 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ATXN2LQ8WWM7 1075 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ACAD9Q9H845 621 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ALG13Q9NP73 1137 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 SAYSD1Q9NPB0 183 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ARHGEF38Q9NXL2 777 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 HNRNPDLO14979 420 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 NMT2O60551 498 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 DAB1O75553 588 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 MAP4P27816 1152 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TAF1BQ53T94 588 aaPredicted RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 CRLF3Q8IUI8 442 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TAB3Q8N5C8 712 aaPredicted RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 CCDC89Q8N998 374 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ZBTB8BQ8NAP8 495 aaPredicted RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TBC1D10AQ9BXI6 508 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 GOLPH3Q9H4A6 298 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 DISC1Q9NRI5 854 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 SFI1A8K8P3 1242 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 CBX6O95503 412 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 TMEM191BP0C7N4 346 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 THOC7Q6I9Y2 204 aaKnown RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 CBFA2T3O75081 653 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 CCNFP41002 786 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 RAP1GDS1P52306 607 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 BASP1P80723 227 aaKnown RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 NXNQ6DKJ4 435 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 CATSPER1Q8NEC5 780 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 RANBP17Q9H2T7 1088 aaKnown RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 ZNF212Q9UDV6 495 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 PLAGL2Q9UPG8 496 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 POLRMTO00411 1230 aaKnown RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 PGM3O95394 542 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 DLATP10515 647 aaKnown RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 P4HA1P13674 534 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 GJC2Q5T442 439 aaPredicted RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 ATG16L1Q676U5 607 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 JAMLQ86YT9 394 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.13□□□□□ -0.31
KDM3A-216ENST00000542128 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 MYLK2Q9H1R3 596 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 PCDHA4Q9UN74 947 aa13.13□□□□□ -0.31
KDM3A-216ENST00000542128 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 WFS1O76024 890 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 KITP10721 976 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 TNFRSF8P28908 595 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 NUP107P57740 925 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 NAB2Q15742 525 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 PRMT6Q96LA8 375 aaPredicted RBP13.12□□□□□ -0.31
KDM3A-216ENST00000542128 MAGEB18Q96M61 343 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 NLRP4Q96MN2 994 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 METTL14Q9HCE5 456 aaKnown RBP13.12□□□□□ -0.31
KDM3A-216ENST00000542128 CIDEBQ9UHD4 219 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 DTNAQ9Y4J8 743 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
KDM3A-216ENST00000542128 PDIA6Q15084 440 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 TMC3Q7Z5M5 1100 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 MTDHQ86UE4 582 aaKnown RBP13.12□□□□□ -0.31
KDM3A-216ENST00000542128 C4orf33Q8N1A6 199 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 GALNT4Q8N4A0 578 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 INPP5DQ92835 1189 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 TLR10Q9BXR5 811 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 PRELID1Q9Y255 219 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 ZBTB5O15062 677 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 SRGAP2CP0DJJ0 459 aa13.12□□□□□ -0.31
KDM3A-216ENST00000542128 LIFRP42702 1097 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms