RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CFAP73A6NFT4 308 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 GOLGA8SH3BPF8 625 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 GOLGA8MH3BSY2 632 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 ZSCAN5DPP0CG00 497 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 RALAP11233 206 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 ERP27Q96DN0 273 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
CNOT9-208ENST00000542068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNOT9-208ENST00000542068 ANKFY1Q9P2R3 1169 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 HAO1Q9UJM8 370 aa16.31■□□□□ 0.2
CNOT9-208ENST00000542068 PIK3CDO00329 1044 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 TTC4O95801 387 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 RRM1P23921 792 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 FOXN2P32314 431 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 GCKP35557 465 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 ERFP50548 548 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 DMP1Q13316 513 aaPredicted RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 NAIF1Q69YI7 327 aaPredicted RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 ZNF570Q96NI8 536 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 RPS6KC1Q96S38 1066 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 TRIM6Q9C030 488 aaPredicted RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 RANBP17Q9H2T7 1088 aaKnown RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 NOCTQ9UK39 431 aaKnown RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 TELO2Q9Y4R8 837 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 KRT15P19012 456 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 SESN3P58005 492 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 ATP11AP98196 1134 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 MGAT5Q09328 741 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 C1orf220Q5T0J3 134 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 SNF8Q96H20 258 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 TCHPQ9BT92 498 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 SNRNP35Q16560 246 aaKnown RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 ECHDC2Q86YB7 292 aa16.3■□□□□ 0.2
CNOT9-208ENST00000542068 SYTL5Q8TDW5 730 aaPredicted RBP16.3■□□□□ 0.2
CNOT9-208ENST00000542068 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 GAS8O95995 478 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 ACOT2P49753 483 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 HMGCS2P54868 508 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 TMEM132AQ24JP5 1023 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 IZUMO3Q5VZ72 239 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 IFT74Q96LB3 600 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 SAYSD1Q9NPB0 183 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 SEL1LQ9UBV2 794 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 TAF1LQ8IZX4 1826 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 SCN9AQ15858 1988 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 PLSCR1O15162 318 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 ZBED4O75132 1171 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 ICAM1P05362 532 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 KRT10P13645 584 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 ETS1P14921 441 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 MFAP3P55082 362 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 ATP13A4Q4VNC1 1196 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 SPDYCQ5MJ68 293 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 CKAP2Q8WWK9 683 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 C11orf70Q9BRQ4 267 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 TMEM206Q9H813 350 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 RNF146Q9NTX7 359 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 ENO4A6NNW6 628 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 IFNB1P01574 187 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 ATF7P17544 494 aaPredicted RBP16.29■□□□□ 0.2
CNOT9-208ENST00000542068 RXRBP28702 533 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 CNGA1P29973 690 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 PSMC4P43686 418 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 BNIP1Q12981 228 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 SNRNP48Q6IEG0 339 aaKnown RBP16.29■□□□□ 0.2
CNOT9-208ENST00000542068 CGB2Q6NT52 195 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 CD101Q93033 1021 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 MRIQ9BWK5 157 aa16.29■□□□□ 0.2
CNOT9-208ENST00000542068 C12orf65Q9H3J6 166 aaKnown RBP16.29■□□□□ 0.2
CNOT9-208ENST00000542068 LRRIQ4A6NIV6 560 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 TP73O15350 636 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 BANF1O75531 89 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 PDHA1P08559 390 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 PLS3P13797 630 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 PSEN1P49768 467 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 ZNF268Q14587 947 aaPredicted RBP16.28■□□□□ 0.2
CNOT9-208ENST00000542068 TAF11Q15544 211 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 ZNF394Q53GI3 561 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
CNOT9-208ENST00000542068 BZW1Q7L1Q6 419 aaKnown RBP16.28■□□□□ 0.2
CNOT9-208ENST00000542068 MCF2L2Q86YR7 1114 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 MYLK2Q9H1R3 596 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 ADAM22Q9P0K1 906 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 CRYMQ14894 314 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 CLUL1Q15846 466 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 NBPF12Q5TAG4 269 aaPredicted RBP16.28■□□□□ 0.2
CNOT9-208ENST00000542068 CROCCP2Q86T23 111 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 FAM71AQ8IYT1 594 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 MAGEC3Q8TD91 643 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 SERPINB12Q96P63 405 aa16.28■□□□□ 0.2
CNOT9-208ENST00000542068 KLF6Q99612 283 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms