RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	SMAD2	Q15796	467 aa	Known RBP	21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	USP41	Q3LFD5	358 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	FAM171A1	Q5VUB5	890 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	JADE1	Q6IE81	842 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	DCLRE1A	Q6PJP8	1040 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	GJD3	Q8N144	294 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	ZSWIM2	Q8NEG5	633 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	SCFD1	Q8WVM8	642 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	DDX27	Q96GQ7	796 aa	Known RBP	21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	EMILIN2	Q9BXX0	1053 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	UBQLN1	Q9UMX0	589 aa	Known RBP	21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	NUB1	Q9Y5A7	615 aa		21.33	■■□□□ 1.01
ARF3-208	ENST00000541959	CLIC2	O15247	247 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	HOXD13	P35453	343 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	BRCC3	P46736	316 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	GUCY2F	P51841	1108 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	DPYD	Q12882	1025 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	STK4	Q13043	487 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	PSMD2	Q13200	908 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	PNOC	Q13519	176 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	TMEM132D	Q14C87	1099 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	UPP1	Q16831	310 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	HS2ST1	Q7LGA3	356 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	CD302	Q8IX05	232 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	TMEM130	Q8N3G9	435 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	BEST2	Q8NFU1	509 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	VN1R2	Q8NFZ6	395 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	RIN2	Q8WYP3	895 aa	Predicted RBP	21.32	■■□□□ 1
ARF3-208	ENST00000541959	TSHZ2	Q9NRE2	1034 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	PRKAG3	Q9UGI9	489 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959	SSX2IP	Q9Y2D8	614 aa		21.32	■■□□□ 1
ARF3-208	ENST00000541959		I3L4J1	428 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	EXTL3	O43909	919 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	KIN	O60870	393 aa	Known RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	CLASP2	O75122	1294 aa	Known RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	NFIC	P08651	508 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	SRGAP2B	P0DMP2	458 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	IGFBP6	P24592	240 aa	Predicted RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	KLRC2	P26717	231 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	CYP2J2	P51589	502 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	ELAVL2	Q12926	359 aa	Known RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	SNW1	Q13573	536 aa	Known RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	KCNC3	Q14003	757 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	CRELD2	Q6UXH1	353 aa	Predicted RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	TMEM184A	Q6ZMB5	413 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	GLYCTK	Q8IVS8	523 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	GPD1L	Q8N335	351 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	SMRP1	Q8NCR6	262 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	KIAA0895	Q8NCT3	520 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	ENGASE	Q8NFI3	743 aa		21.31	■■□□□ 1
ARF3-208	ENST00000541959	IPO9	Q96P70	1041 aa	Known RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	RBAK	Q9NYW8	714 aa	Predicted RBP	21.31	■■□□□ 1
ARF3-208	ENST00000541959	ANK1	P16157	1881 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	SPDYE4	A6NLX3	237 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	TRAPPC3	O43617	180 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	SSTR3	P32745	418 aa	Predicted RBP	21.3	■■□□□ 1
ARF3-208	ENST00000541959	RPL9	P32969	192 aa	Known RBP	21.3	■■□□□ 1
ARF3-208	ENST00000541959	DSG1	Q02413	1049 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	KNOP1	Q1ED39	458 aa	Known RBP	21.3	■■□□□ 1
ARF3-208	ENST00000541959	RNF168	Q8IYW5	571 aa	Predicted RBP	21.3	■■□□□ 1
ARF3-208	ENST00000541959	C3orf58	Q8NDZ4	430 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	KLHL5	Q96PQ7	755 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	TTPAL	Q9BTX7	342 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	ASB7	Q9H672	318 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	AGPAT3	Q9NRZ7	376 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	HSPBP1	Q9NZL4	362 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	HOOK1	Q9UJC3	728 aa	Known RBP	21.3	■■□□□ 1
ARF3-208	ENST00000541959	IRAK3	Q9Y616	596 aa		21.3	■■□□□ 1
ARF3-208	ENST00000541959	TMEM189-UBE2V1	I3L0A0	370 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	KIAA0391	O15091	583 aa	Known RBP	21.29	■■□□□ 1
ARF3-208	ENST00000541959	TGFB1I1	O43294	461 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	IL18RAP	O95256	599 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	CNP	P09543	421 aa	Known RBP	21.29	■■□□□ 1
ARF3-208	ENST00000541959	MCM4	P33991	863 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	ZP2	Q05996	745 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	BMT2	Q1RMZ1	405 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	RTP2	Q5QGT7	225 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	KIAA0319	Q5VV43	1072 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	PRSS55	Q6UWB4	352 aa	Predicted RBP	21.29	■■□□□ 1
ARF3-208	ENST00000541959	BRSK2	Q8IWQ3	736 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	ADHFE1	Q8IWW8	467 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	KHSRP	Q92945	711 aa	Known RBP eCLIP	21.29	■■□□□ 1
ARF3-208	ENST00000541959	APOL5	Q9BWW9	433 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	HCFC2	Q9Y5Z7	792 aa		21.29	■■□□□ 1
ARF3-208	ENST00000541959	PRPF40A	O75400	957 aa	Known RBP	21.28	■■□□□ 1
ARF3-208	ENST00000541959	RHOBTB3	O94955	611 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	ADRB2	P07550	413 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	RPL17	P18621	184 aa	Known RBP	21.28	■■□□□ 1
ARF3-208	ENST00000541959	CYP3A5	P20815	502 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	RDH13	Q8NBN7	331 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	CASP10	Q92851	521 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	ERCC4	Q92889	916 aa	Predicted RBP	21.28	■■□□□ 1
ARF3-208	ENST00000541959	TSPAN18	Q96SJ8	248 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	CHST7	Q9NS84	486 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	MAPK8IP1	Q9UQF2	711 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	DERA	Q9Y315	318 aa		21.28	■■□□□ 1
ARF3-208	ENST00000541959	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	21.28	■■□□□ 1
ARF3-208	ENST00000541959	C19orf67	A6NJJ6	358 aa		21.27	■■□□□ 1
ARF3-208	ENST00000541959	ZNF233	A6NK53	670 aa		21.27	■■□□□ 1
ARF3-208	ENST00000541959	LILRB3	O75022	631 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms