RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 TPRG1Q6ZUI0 275 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 MTSS1LQ765P7 747 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 HACE1Q8IYU2 909 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 IQUBQ8NA54 791 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 HASPINQ8TF76 798 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 KIFAP3Q92845 792 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 KXD1Q9BQD3 176 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 GDPD2Q9HCC8 539 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 LTB4R2Q9NPC1 389 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 CHST7Q9NS84 486 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 ZSCAN32Q9NX65 697 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 KLK14Q9P0G3 267 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 CACNG4Q9UBN1 327 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 PARP2Q9UGN5 583 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 ADAM28Q9UKQ2 775 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 CDH7Q9ULB5 785 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 PCDHGA2Q9Y5H1 932 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 ZFP37Q9Y6Q3 630 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 GVINP1Q7Z2Y8 2422 aa9.55□□□□□ -0.88
CLSTN3-212ENST00000541770 DMXL1Q9Y485 3027 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 INO80B-WBP1J3KQ70 363 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 NCAM2O15394 837 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 C8AP07357 584 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 AKAP5P24588 427 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 PFKPQ01813 784 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 CREMQ03060 361 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 DSC1Q08554 894 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 SPEM2Q0P670 501 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 MCM6Q14566 821 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 NOTUMQ6P988 496 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 LILRA6Q6PI73 481 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 CDR2LQ86X02 465 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 IFNLR1Q8IU57 520 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 PDILTQ8N807 584 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 ITFG1Q8TB96 612 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 ING5Q8WYH8 240 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 FGF13Q92913 245 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 RTKNQ9BST9 563 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 RUSC1Q9BVN2 902 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 NFKBIZQ9BYH8 718 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 POLR3FQ9H1D9 316 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 NXF3Q9H4D5 531 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 C17orf75Q9HAS0 396 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 MAGEF1Q9HAY2 307 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 FNIP2Q9P278 1114 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 USP25Q9UHP3 1055 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 RAB23Q9ULC3 237 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 KCNH3Q9ULD8 1083 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 ODF2LQ9ULJ1 636 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 HPSEQ9Y251 543 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 RALGAPA1Q6GYQ0 2036 aa9.54□□□□□ -0.88
CLSTN3-212ENST00000541770 TCHHQ07283 1943 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 A0A1B0GVL5 298 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 CASTOR2A6NHX0 329 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 POLR2DO15514 142 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 TSPAN1O60635 241 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 XYLBO75191 536 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 NPTXRO95502 500 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 EFEMP2O95967 443 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 PFKFB1P16118 471 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 GLRA2P23416 452 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 TARSP26639 723 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 AXLP30530 894 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 MAPK7Q13164 816 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 TFDP1Q14186 410 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 PPP2R5AQ15172 486 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 PCBP1Q15365 356 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 PSMD5Q16401 504 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 ARSHQ5FYA8 562 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 RTP2Q5QGT7 225 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 FAM171A1Q5VUB5 890 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 PRR23BQ6ZRT6 265 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 SV2BQ7L1I2 683 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 GPBP1Q86WP2 473 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 DAW1Q8N136 415 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 ZBTB44Q8NCP5 570 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 ASAP3Q8TDY4 903 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 MCRS1Q96EZ8 462 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 BORCS6Q96GS4 357 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 DDX23Q9BUQ8 820 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 PANK2Q9BZ23 570 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 LRRC27Q9C0I9 530 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 TNMDQ9H2S6 317 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 GPRC5CQ9NQ84 441 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 KBTBD4Q9NVX7 518 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 HCFC1R1Q9NWW0 138 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 KCNG1Q9UIX4 513 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 FBXW11Q9UKB1 542 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 NDRG2Q9UN36 371 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 GIT1Q9Y2X7 761 aa9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 SF3B1O75533 1304 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLSTN3-212ENST00000541770 TICRRQ7Z2Z1 1910 aa9.52□□□□□ -0.88
CLSTN3-212ENST00000541770 DNAH14Q0VDD8 3507 aa9.52□□□□□ -0.88
CLSTN3-212ENST00000541770 CACNA1AO00555 2505 aa9.52□□□□□ -0.88
CLSTN3-212ENST00000541770 EP300Q09472 2414 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-212ENST00000541770 GOLGA6L4A6NEF3 574 aa9.52□□□□□ -0.89
CLSTN3-212ENST00000541770 TBC1D4O60343 1298 aa9.52□□□□□ -0.89
CLSTN3-212ENST00000541770 HIP1RO75146 1068 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms