RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 UAP1L1Q3KQV9 507 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 CTXN3Q4LDR2 81 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 NAALADL2Q58DX5 795 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 PPP1R18Q6NYC8 613 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 TRMT11Q7Z4G4 463 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 PARGQ86W56 976 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 BLOC1S5Q8TDH9 187 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 RABGGTAQ92696 567 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 FBXO32Q969P5 355 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 KLHL29Q96CT2 875 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 OPTNQ96CV9 577 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 BTBD6Q96KE9 485 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 OMDQ99983 421 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 NDRG2Q9UN36 371 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 TIMM13Q9Y5L4 95 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 FHOD1Q9Y613 1164 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 SPACA6W5XKT8 324 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 PITPNM2Q9BZ72 1349 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 CARMIL3Q8ND23 1372 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 PRR23D1E9PI22 279 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 PRR23D2P0DMB1 279 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 VEGFAP15692 232 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 YWHABP31946 246 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 MRPS15P82914 257 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 ZNF589Q86UQ0 364 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 FBXO16Q8IX29 292 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 SRRM1Q8IYB3 904 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 C7orf61Q8IZ16 206 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 GLIS2Q9BZE0 524 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 DCTN4Q9UJW0 460 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 TNFSF13BQ9Y275 285 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 VCLP18206 1134 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 EIF4A3P38919 411 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 SERPINB4P48594 390 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 GPS1Q13098 491 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 FAM118BQ9BPY3 351 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 NUP85Q9BW27 656 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 SHCBP1LQ9BZQ2 653 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 ZBTB40Q9NUA8 1239 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 LIMA1Q9UHB6 759 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 MLH3Q9UHC1 1453 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 COL15A1P39059 1388 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 MAP3K6O95382 1288 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 TRIM49P0CI25 452 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 TRIM49CP0CI26 452 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 ESRRAP11474 423 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 CHI3L1P36222 383 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 PRKAA1Q13131 559 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 PDIA6Q15084 440 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 PPM1LQ5SGD2 360 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 C16orf59Q7L2K0 433 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 DCP1BQ8IZD4 617 aaKnown RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 SLC30A5Q8TAD4 765 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 RPRD1AQ96P16 312 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 C17orf80Q9BSJ5 609 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 PCDHB6Q9Y5E3 794 aa6.64□□□□□ -1.35
DMD-228ENST00000541735 EPN1Q9Y6I3 576 aaPredicted RBP6.64□□□□□ -1.35
DMD-228ENST00000541735 TARSL2A2RTX5 802 aaKnown RBP6.63□□□□□ -1.35
DMD-228ENST00000541735 HEATR9A2RTY3 570 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 APOL1O14791 398 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 MSH4O15457 936 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 H2AFYO75367 372 aaKnown RBP6.63□□□□□ -1.35
DMD-228ENST00000541735 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 GRIN1Q05586 938 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 EFEMP1Q12805 493 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 E2F5Q15329 346 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 DUOXA2Q1HG44 320 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 KLHL24Q6TFL4 600 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 FAM47EQ6ZV65 393 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 ANKRD13AQ8IZ07 590 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 OR9Q1Q8NGQ5 310 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
DMD-228ENST00000541735 ADNPQ9H2P0 1102 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 PCMTD2Q9NV79 361 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 GULP1Q9UBP9 304 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 PARD3Q8TEW0 1356 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 ATP10DQ9P241 1426 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 EEF2KO00418 725 aaKnown RBP6.63□□□□□ -1.35
DMD-228ENST00000541735 NBNO60934 754 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 KRT14P02533 472 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 GSTM1P09488 218 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 WEE2P0C1S8 567 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 MCF2P10911 925 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 VAMP7P51809 220 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 KRT76Q01546 638 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 ACOX1Q15067 660 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 VPS37AQ8NEZ2 397 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 CPA5Q8WXQ8 436 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 DBNLQ9UJU6 430 aaKnown RBP6.63□□□□□ -1.35
DMD-228ENST00000541735 VPS28Q9UK41 221 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 PCDHA7Q9UN72 937 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 SLC9A8Q9Y2E8 581 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 RALGAPBQ86X10 1494 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 CCDC151A5D8V7 595 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 SPATA31D3P0C874 917 aa6.63□□□□□ -1.35
DMD-228ENST00000541735 GCFC2P16383 781 aaKnown RBP6.63□□□□□ -1.35
DMD-228ENST00000541735 FEN1P39748 380 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms