RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 WDR5P61964 334 aaKnown RBP29.99■■■□□ 2.39
CCM2-218ENST00000541586 CDK17Q00537 523 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 BRSK2Q8IWQ3 736 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 THNSL1Q8IYQ7 743 aa29.99■■■□□ 2.39
CCM2-218ENST00000541586 AJAP1Q9UKB5 411 aaPredicted RBP29.99■■■□□ 2.39
CCM2-218ENST00000541586 CPSF3Q9UKF6 684 aaKnown RBP29.99■■■□□ 2.39
CCM2-218ENST00000541586 EFCAB14O75071 495 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 SHHQ15465 462 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 IQCEQ6IPM2 695 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 SV2AQ7L0J3 742 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 HERVK_113Q902F9 699 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 ZNF516Q92618 1163 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 SYN2Q92777 582 aaPredicted RBP29.98■■■□□ 2.39
CCM2-218ENST00000541586 APEX2Q9UBZ4 518 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 COQ4Q9Y3A0 265 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 IPPQ9Y573 584 aa29.98■■■□□ 2.39
CCM2-218ENST00000541586 TNNI1P19237 187 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 CLCN1P35523 988 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 DEFB103AP81534 67 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 SFMBT2Q5VUG0 894 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 FAM117BQ6P1L5 589 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 APBB1IPQ7Z5R6 666 aaPredicted RBP29.97■■■□□ 2.39
CCM2-218ENST00000541586 TMCO2Q7Z6W1 182 aaPredicted RBP29.97■■■□□ 2.39
CCM2-218ENST00000541586 ECHDC2Q86YB7 292 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 CEP120Q8N960 986 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 LPPQ93052 612 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 DESI2Q9BSY9 194 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 NXF3Q9H4D5 531 aaKnown RBP29.97■■■□□ 2.39
CCM2-218ENST00000541586 LRFN2Q9ULH4 789 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 PCDHB7Q9Y5E2 793 aa29.97■■■□□ 2.39
CCM2-218ENST00000541586 RANBP2P49792 3224 aaKnown RBP29.97■■■□□ 2.39
CCM2-218ENST00000541586 LRRN2O75325 713 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 DCAF4L1Q3SXM0 396 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 LMBRD2Q68DH5 695 aaPredicted RBP29.96■■■□□ 2.39
CCM2-218ENST00000541586 FAM84AQ96KN4 292 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 SPAG5Q96R06 1193 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 PTPRJQ12913 1337 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 AMHP03971 560 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 MCF2P10911 925 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 RAPGEF1Q13905 1077 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 C15orf39Q6ZRI6 1047 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 GPIHBP1Q8IV16 184 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 SMG8Q8ND04 991 aaKnown RBP29.96■■■□□ 2.39
CCM2-218ENST00000541586 SEMA4DQ92854 862 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 RNPC3Q96LT9 517 aaKnown RBP29.96■■■□□ 2.39
CCM2-218ENST00000541586 CGRRF1Q99675 332 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 TRAIPQ9BWF2 469 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 MTIF3Q9H2K0 278 aaKnown RBP29.96■■■□□ 2.39
CCM2-218ENST00000541586 RNF39Q9H2S5 420 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 SNTG2Q9NY99 539 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 PPP2R2CQ9Y2T4 447 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 SLC4A7Q9Y6M7 1214 aa29.96■■■□□ 2.39
CCM2-218ENST00000541586 LAMA2P24043 3122 aaKnown RBP29.95■■■□□ 2.39
CCM2-218ENST00000541586 SKIP12755 728 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 AKAP5P24588 427 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 RAB27AP51159 221 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 JAM2P57087 298 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 FAM189BP81408 668 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 PHLDB3Q6NSJ2 640 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 FBXL13Q8NEE6 735 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 TAS1R2Q8TE23 839 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 PPP1R13BQ96KQ4 1090 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 NHEJ1Q9H9Q4 299 aaPredicted RBP29.95■■■□□ 2.38
CCM2-218ENST00000541586 AIPL1Q9NZN9 384 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 PARP2Q9UGN5 583 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 DNAJC12Q9UKB3 198 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 MYO6Q9UM54 1294 aa29.95■■■□□ 2.38
CCM2-218ENST00000541586 MEIS3P2A8K0S8 358 aa29.94■■■□□ 2.38
CCM2-218ENST00000541586 CHRDL2Q6WN34 429 aa29.94■■■□□ 2.38
CCM2-218ENST00000541586 FAM43BQ6ZT52 329 aaPredicted RBP29.94■■■□□ 2.38
CCM2-218ENST00000541586 ARHGAP20Q9P2F6 1191 aa29.94■■■□□ 2.38
CCM2-218ENST00000541586 DAAM1Q9Y4D1 1078 aa29.94■■■□□ 2.38
CCM2-218ENST00000541586 ADGRG1Q9Y653 693 aa29.94■■■□□ 2.38
CCM2-218ENST00000541586 C4BPAP04003 597 aaKnown RBP29.93■■■□□ 2.38
CCM2-218ENST00000541586 PLEKP08567 350 aaPredicted RBP29.93■■■□□ 2.38
CCM2-218ENST00000541586 TMEM192Q8IY95 271 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 RAB20Q9NX57 234 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 EPN1Q9Y6I3 576 aaPredicted RBP29.93■■■□□ 2.38
CCM2-218ENST00000541586 MICAL3Q7RTP6 2002 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 CCP110O43303 1012 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 ZSCAN12O43309 604 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 ZNF623O75123 536 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 NDUFA10O95299 355 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 ITGA4P13612 1032 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 RFX1P22670 979 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 ENOX2Q16206 610 aaKnown RBP29.93■■■□□ 2.38
CCM2-218ENST00000541586 ZACNQ401N2 412 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 HGSNATQ68CP4 663 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 CCDC170Q8IYT3 715 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 TOP1MTQ969P6 601 aa29.93■■■□□ 2.38
CCM2-218ENST00000541586 STAG3L1P0CL83 205 aa29.92■■■□□ 2.38
CCM2-218ENST00000541586 ATF7P17544 494 aaPredicted RBP29.92■■■□□ 2.38
CCM2-218ENST00000541586 TDRD10Q5VZ19 366 aaKnown RBP29.92■■■□□ 2.38
CCM2-218ENST00000541586 ARHGEF19Q8IW93 802 aa29.92■■■□□ 2.38
CCM2-218ENST00000541586 HACE1Q8IYU2 909 aa29.92■■■□□ 2.38
CCM2-218ENST00000541586 PGBD4Q96DM1 585 aa29.92■■■□□ 2.38
CCM2-218ENST00000541586 FAM212AQ96EL1 285 aa29.92■■■□□ 2.38
CCM2-218ENST00000541586 STK33Q9BYT3 514 aa29.92■■■□□ 2.38
CCM2-218ENST00000541586 TMEM161AQ9NX61 479 aa29.92■■■□□ 2.38
CCM2-218ENST00000541586 KLK14Q9P0G3 267 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms