RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 RTL10Q7L3V2 364 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 ZNF461Q8TAF7 563 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 C18orf25Q96B23 403 aaPredicted RBP26.27■■□□□ 1.8
LEMD3-203ENST00000541171 KIF2CQ99661 725 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 MMTAG2Q9BU76 263 aaKnown RBP26.27■■□□□ 1.8
LEMD3-203ENST00000541171 NUB1Q9Y5A7 615 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 MYH15Q9Y2K3 1946 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 KANSL1LA0AUZ9 987 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 LAD1O00515 517 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 PRRG1O14668 218 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 UBXN2BQ14CS0 331 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 SLC5A9Q2M3M2 681 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 MCTP1Q6DN14 999 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 PLIN2Q99541 437 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 SEMA4AQ9H3S1 761 aa26.26■■□□□ 1.79
LEMD3-203ENST00000541171 MTF2Q9Y483 593 aaPredicted RBP26.26■■□□□ 1.79
LEMD3-203ENST00000541171 WDR27A2RRH5 827 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 KCNE1P15382 129 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 PTPN2P17706 415 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 CD72P21854 359 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 PROZP22891 400 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 STRN3Q13033 797 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 SEZ6Q53EL9 994 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 SLC8B1Q6J4K2 584 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 CYP4F11Q9HBI6 524 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.25■■□□□ 1.79
LEMD3-203ENST00000541171 ANKFY1Q9P2R3 1169 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 GVINP1Q7Z2Y8 2422 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 COL4A3Q01955 1670 aa26.25■■□□□ 1.79
LEMD3-203ENST00000541171 NOTCH4Q99466 2003 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 H7C4K7 107 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 ABLIM1O14639 778 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 ABLIM3O94929 683 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 PRPHP41219 470 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 PFKPQ01813 784 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 PRKCQQ04759 706 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 CORO1BQ9BR76 489 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 PLA2G2FQ9BZM2 168 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 C17orf75Q9HAS0 396 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 CNTN3Q9P232 1028 aa26.24■■□□□ 1.79
LEMD3-203ENST00000541171 ARHGEF37A1IGU5 675 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 FAM170BA6NMN3 283 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 SYN3O14994 580 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 MEFVO15553 781 aaPredicted RBP26.23■■□□□ 1.79
LEMD3-203ENST00000541171 SEC24AO95486 1093 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 CEBPBP17676 345 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 RPL9P32969 192 aaKnown RBP26.23■■□□□ 1.79
LEMD3-203ENST00000541171 ID4P47928 161 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 CTXN3Q4LDR2 81 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 ZC3H14Q6PJT7 736 aaKnown RBP26.23■■□□□ 1.79
LEMD3-203ENST00000541171 BCO2Q9BYV7 579 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 SPATA6Q9NWH7 488 aaPredicted RBP26.23■■□□□ 1.79
LEMD3-203ENST00000541171 FBXL5Q9UKA1 691 aa26.23■■□□□ 1.79
LEMD3-203ENST00000541171 TBC1D4O60343 1298 aa26.22■■□□□ 1.79
LEMD3-203ENST00000541171 ATF2P15336 505 aa26.22■■□□□ 1.79
LEMD3-203ENST00000541171 MCM4P33991 863 aa26.22■■□□□ 1.79
LEMD3-203ENST00000541171 MATR3P43243 847 aaKnown RBP eCLIP26.22■■□□□ 1.798e-7■■■■□ 20.9
LEMD3-203ENST00000541171 POTEHQ6S545 545 aa26.22■■□□□ 1.79
LEMD3-203ENST00000541171 PNMA5Q96PV4 448 aa26.22■■□□□ 1.79
LEMD3-203ENST00000541171 DDX23Q9BUQ8 820 aaKnown RBP26.22■■□□□ 1.79
LEMD3-203ENST00000541171 TIPINQ9BVW5 301 aa26.22■■□□□ 1.79
LEMD3-203ENST00000541171 GDE1Q9NZC3 331 aa26.22■■□□□ 1.79
LEMD3-203ENST00000541171 EP300Q09472 2414 aaPredicted RBP26.22■■□□□ 1.79
LEMD3-203ENST00000541171 ECI2O75521 394 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 TOM1L1O75674 476 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 PLS3P13797 630 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 GUCY2CP25092 1073 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 SMTNP53814 917 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 MRPL58Q14197 206 aaKnown RBP26.21■■□□□ 1.79
LEMD3-203ENST00000541171 NOLC1Q14978 699 aaKnown RBP eCLIP26.21■■□□□ 1.79
LEMD3-203ENST00000541171 SLC10A6Q3KNW5 377 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 TANGO2Q6ICL3 276 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 TPRG1Q6ZUI0 275 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 TCEAL8Q8IYN2 117 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 SPIRE2Q8WWL2 714 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 TCEAL4Q96EI5 215 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 TBC1D32Q96NH3 1257 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 HINFPQ9BQA5 517 aa26.21■■□□□ 1.79
LEMD3-203ENST00000541171 NTPCRQ9BSD7 190 aaKnown RBP26.21■■□□□ 1.79
LEMD3-203ENST00000541171 CACNB1Q02641 598 aaPredicted RBP26.2■■□□□ 1.78
LEMD3-203ENST00000541171 SPAG1Q07617 926 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 MAML2Q8IZL2 1156 aaPredicted RBP26.2■■□□□ 1.78
LEMD3-203ENST00000541171 TMEM130Q8N3G9 435 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 TMEM161BQ8NDZ6 487 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 SUSD3Q96L08 255 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 LTB4R2Q9NPC1 389 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 AVENQ9NQS1 362 aaPredicted RBP26.2■■□□□ 1.78
LEMD3-203ENST00000541171 TUBGCP4Q9UGJ1 667 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 INSL5Q9Y5Q6 135 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 CACNA1IQ9P0X4 2223 aa26.2■■□□□ 1.78
LEMD3-203ENST00000541171 NPHP3-ACAD11A0A0J9YXS1 232 aa26.19■■□□□ 1.78
LEMD3-203ENST00000541171 VWA3AA6NCI4 1184 aa26.19■■□□□ 1.78
LEMD3-203ENST00000541171 LAMTOR5O43504 91 aa26.19■■□□□ 1.78
LEMD3-203ENST00000541171 MAPTP10636 758 aaKnown RBP26.19■■□□□ 1.78
LEMD3-203ENST00000541171 ATP2C1P98194 919 aaPredicted RBP26.19■■□□□ 1.78
LEMD3-203ENST00000541171 FOXK2Q01167 660 aa26.19■■□□□ 1.78
LEMD3-203ENST00000541171 RILPL1Q5EBL4 403 aa26.19■■□□□ 1.78
LEMD3-203ENST00000541171 PRSS36Q5K4E3 855 aa26.19■■□□□ 1.78
LEMD3-203ENST00000541171 ZNF280DQ6N043 979 aa26.19■■□□□ 1.78
LEMD3-203ENST00000541171 KIAA2013Q8IYS2 634 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms