RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SIX4Q9UIU6 781 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 NOCTQ9UK39 431 aaKnown RBP26.39■■□□□ 1.82
TTC3-225ENST00000540756 NOC2LQ9Y3T9 749 aaKnown RBP26.39■■□□□ 1.82
TTC3-225ENST00000540756 TRIM17Q9Y577 477 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 CDY2AQ9Y6F7 541 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 CAPN6Q9Y6Q1 641 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 MROH7Q68CQ1 1323 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 URI1O94763 535 aaPredicted RBP26.39■■□□□ 1.81
TTC3-225ENST00000540756 MOCS3O95396 460 aa26.39■■□□□ 1.81
TTC3-225ENST00000540756 ASS1P00966 412 aaKnown RBP26.39■■□□□ 1.81
TTC3-225ENST00000540756 CCDC172P0C7W6 258 aa26.39■■□□□ 1.81
TTC3-225ENST00000540756 GRK4P32298 578 aa26.39■■□□□ 1.81
TTC3-225ENST00000540756 MRPS6P82932 125 aaKnown RBP26.39■■□□□ 1.81
TTC3-225ENST00000540756 CUL2Q13617 745 aa26.39■■□□□ 1.81
TTC3-225ENST00000540756 NOTUMQ6P988 496 aa26.39■■□□□ 1.81
TTC3-225ENST00000540756 C1orf127Q8N9H9 656 aa26.39■■□□□ 1.81
TTC3-225ENST00000540756 NXF3Q9H4D5 531 aaKnown RBP26.39■■□□□ 1.81
TTC3-225ENST00000540756 CHRNA1P02708 482 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 CHRNB2P17787 502 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 ACLYP53396 1101 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 NCBP1Q09161 790 aaKnown RBP26.38■■□□□ 1.81
TTC3-225ENST00000540756 RNF180Q86T96 592 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 VPS36Q86VN1 386 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 FAM228AQ86W67 206 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 RPUSD2Q8IZ73 545 aaKnown RBP26.38■■□□□ 1.81
TTC3-225ENST00000540756 PCSK9Q8NBP7 692 aaKnown RBP26.38■■□□□ 1.81
TTC3-225ENST00000540756 SH3TC2Q8TF17 1288 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 ANKRD36BP1Q96IX9 119 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 TSGA10Q9BZW7 698 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 TRMT13Q9NUP7 481 aaKnown RBP26.38■■□□□ 1.81
TTC3-225ENST00000540756 SAGE1Q9NXZ1 904 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 BUB1O43683 1085 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 TNNC2P02585 160 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 ACO1P21399 889 aaKnown RBP26.38■■□□□ 1.81
TTC3-225ENST00000540756 TNFAIP3P21580 790 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 GRM5P41594 1212 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 SECISBP2LQ93073 1101 aaKnown RBP26.38■■□□□ 1.81
TTC3-225ENST00000540756 XYLT2Q9H1B5 865 aa26.38■■□□□ 1.81
TTC3-225ENST00000540756 KRT19P08727 400 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 CYP11B1P15538 503 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 ITGA7Q13683 1181 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 PTGISQ16647 500 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 DCAF4L1Q3SXM0 396 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 SLAIN1Q8ND83 568 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 PCDHB18PQ96TA0 734 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 MYO1AQ9UBC5 1043 aa26.37■■□□□ 1.81
TTC3-225ENST00000540756 ENC1O14682 589 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 MYCP01106 439 aaPredicted RBP26.36■■□□□ 1.81
TTC3-225ENST00000540756 MMEP08473 750 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 TRPC3Q13507 836 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 UBXN11Q5T124 520 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 ENOSF1Q7L5Y1 443 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 FMNL3Q8IVF7 1028 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 CXorf38Q8TB03 319 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 APOL6Q9BWW8 343 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 HMX1Q9NP08 348 aaPredicted RBP26.36■■□□□ 1.81
TTC3-225ENST00000540756 AKAP5P24588 427 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 ANXA13P27216 316 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 SESTD1Q86VW0 696 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 ASB7Q9H672 318 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 L2HGDHQ9H9P8 463 aa26.36■■□□□ 1.81
TTC3-225ENST00000540756 TFRCP02786 760 aaKnown RBP26.35■■□□□ 1.81
TTC3-225ENST00000540756 ITGB3P05106 788 aa26.35■■□□□ 1.81
TTC3-225ENST00000540756 PCBP1Q15365 356 aaKnown RBP eCLIP26.35■■□□□ 1.81
TTC3-225ENST00000540756 LRRN4CLQ8ND94 238 aa26.35■■□□□ 1.81
TTC3-225ENST00000540756 MYRIPQ8NFW9 859 aa26.35■■□□□ 1.81
TTC3-225ENST00000540756 DDX1Q92499 740 aaKnown RBP26.35■■□□□ 1.81
TTC3-225ENST00000540756 ZMAT2Q96NC0 199 aaKnown RBP26.35■■□□□ 1.81
TTC3-225ENST00000540756 RNF39Q9H2S5 420 aa26.35■■□□□ 1.81
TTC3-225ENST00000540756 TRPV2Q9Y5S1 764 aa26.35■■□□□ 1.81
TTC3-225ENST00000540756 FRMPD3Q5JV73 1810 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 KYAT1Q16773 422 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 SGSM1Q2NKQ1 1148 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 CCDC94Q9BW85 323 aaPredicted RBP26.34■■□□□ 1.81
TTC3-225ENST00000540756 IMPG2Q9BZV3 1241 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 TRIM6Q9C030 488 aaPredicted RBP26.34■■□□□ 1.81
TTC3-225ENST00000540756 SENP6Q9GZR1 1112 aaPredicted RBP26.34■■□□□ 1.81
TTC3-225ENST00000540756 POLIQ9UNA4 740 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 THPOP40225 353 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 GALCP54803 685 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 FMO1Q01740 532 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 TMEM132DQ14C87 1099 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 ZNF699Q32M78 642 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 TMEM270Q6UE05 265 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 SCARA5Q6ZMJ2 495 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 TSC1Q92574 1164 aa26.34■■□□□ 1.81
TTC3-225ENST00000540756 UQCRHLA0A096LP55 91 aa26.33■■□□□ 1.81
TTC3-225ENST00000540756 CTAGE9A4FU28 777 aa26.33■■□□□ 1.81
TTC3-225ENST00000540756 UQCRHP07919 91 aa26.33■■□□□ 1.81
TTC3-225ENST00000540756 GLRA4Q5JXX5 417 aa26.33■■□□□ 1.81
TTC3-225ENST00000540756 KIF12Q96FN5 646 aa26.33■■□□□ 1.81
TTC3-225ENST00000540756 LUC7LQ9NQ29 371 aaKnown RBP26.33■■□□□ 1.81
TTC3-225ENST00000540756 PCDHB4Q9Y5E5 795 aa26.33■■□□□ 1.81
TTC3-225ENST00000540756 M0QZ92 97 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 ATP1A1P05023 1023 aaKnown RBP26.32■■□□□ 1.8
TTC3-225ENST00000540756 WEE2P0C1S8 567 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 AXLP30530 894 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 POU5F1Q01860 360 aaKnown RBP26.32■■□□□ 1.8
TTC3-225ENST00000540756 MGAT3Q09327 533 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 C10orf76Q5T2E6 689 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms