RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 CREMQ03060 361 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 ZNF174Q15697 407 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 CCDC6Q16204 474 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 LRCH2Q5VUJ6 765 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 LARP1BQ659C4 914 aaKnown RBP9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 TWF2Q6IBS0 349 aaKnown RBP9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 EFCAB12Q6NXP0 572 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 C19orf48Q6RUI8 117 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 NOSTRINQ8IVI9 506 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 LINC01465Q8N7H1 131 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 C4orf32Q8N8J7 132 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 INTS4Q96HW7 963 aaKnown RBP9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 FAM20AQ96MK3 541 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 MTMR9Q96QG7 549 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 TEKT3Q9BXF9 490 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 TMEM60Q9H2L4 133 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 TRPV5Q9NQA5 729 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 DISC1Q9NRI5 854 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 FAM105AQ9NUU6 356 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 GDE1Q9NZC3 331 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 PCDHA10Q9Y5I2 948 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 GREB1Q4ZG55 1949 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 SDK1Q7Z5N4 2213 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 AKAP13Q12802 2813 aa9.83□□□□□ -0.84
TRAPPC1-202ENST00000540486 ADAMTS20P59510 1910 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 C4orf47A7E2U8 309 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 TBX3O15119 743 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 ZNF862O60290 1169 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 B4GALT3O60512 393 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 GAS7O60861 476 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 XYLBO75191 536 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 STBD1O95210 358 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 POU2F2P09086 479 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 CLCN3P51790 818 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 MLLT6P55198 1093 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 NTHL1P78549 312 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 SPIRE1Q08AE8 756 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 C19orf57Q0VDD7 668 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 GAS6Q14393 721 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 LONRF3Q496Y0 759 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 HEATR6Q6AI08 1181 aaKnown RBP9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 MIS18BP1Q6P0N0 1132 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 C1orf228Q6PIY5 440 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 NYAP1Q6ZVC0 841 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 CKAP2LQ8IYA6 745 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 SMAP1Q8IYB5 467 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 ITFG1Q8TB96 612 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 IRF7Q92985 503 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 ELSPBP1Q96BH3 223 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 NAP1L4Q99733 375 aaKnown RBP9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 EDEM2Q9BV94 578 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 BRD9Q9H8M2 597 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 GABBR1Q9UBS5 961 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 VAV3Q9UKW4 847 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 EVPLQ92817 2033 aa9.82□□□□□ -0.84
TRAPPC1-202ENST00000540486 CCDC163A0A0D9SF12 145 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 FAM221BA6H8Z2 402 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 MEIS3P2A8K0S8 358 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 CYSRT1A8MQ03 144 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 WDR64B1ANS9 1081 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 CHMP2AO43633 222 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 AKAP3O75969 853 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 CAPNS1P04632 268 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 PSAPP07602 524 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 SYT1P21579 422 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 FGFR4P22455 802 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 MCM7P33993 719 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 CLCN1P35523 988 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 MPLP40238 635 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 PPP2R5CQ13362 524 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 LRRC32Q14392 662 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 UGCGQ16739 394 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 COL28A1Q2UY09 1125 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 USP41Q3LFD5 358 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 PPM1LQ5SGD2 360 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 NPAS3Q8IXF0 933 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 GAB3Q8WWW8 586 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 ZC3H10Q96K80 434 aaKnown RBP9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 SCLT1Q96NL6 688 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 BBC3Q96PG8 261 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 GCOM2Q9BZD3 368 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 PLA2G2FQ9BZM2 168 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 INO80BQ9C086 356 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 PLSCR2Q9NRY7 297 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 MARCH5Q9NX47 278 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 FBXW11Q9UKB1 542 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 KIF3AQ9Y496 699 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 SAMM50Q9Y512 469 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 PCDHB6Q9Y5E3 794 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 CNTNAP2Q9UHC6 1331 aa9.81□□□□□ -0.84
TRAPPC1-202ENST00000540486 H3BQV1 296 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 HYAL3O43820 417 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 NR1I2O75469 434 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 RPP40O75818 363 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 BAG4O95429 457 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 SFNP31947 248 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 RDXP35241 583 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 TXKP42681 527 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 TRAPPC10P48553 1259 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms