RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 DDIT3P35638 169 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 BRCC3P46736 316 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 GTF2BQ00403 316 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 KYAT1Q16773 422 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 AXDND1Q5T1B0 1012 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 SLC44A3Q8N4M1 653 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 TMEM105Q8N8V8 129 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 ZNF461Q8TAF7 563 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 IRF2BPLQ9H1B7 796 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 ST6GALNAC4Q9H4F1 302 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 PARVGQ9HBI0 331 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 AVENQ9NQS1 362 aaPredicted RBP14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 WNT16Q9UBV4 365 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 TBX20Q9UMR3 447 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 SRPRBQ9Y5M8 271 aaKnown RBP14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 CDY1Q9Y6F8 540 aa14.32□□□□□ -0.12
SEMA4D-223ENST00000540475 ARHGEF37A1IGU5 675 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 CYP3A5P20815 502 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 SYT1P21579 422 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 LRPAP1P30533 357 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 GBP2P32456 591 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 RESTQ13127 1097 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 HTR4Q13639 388 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 PPM1LQ5SGD2 360 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 VARS2Q5ST30 1063 aaKnown RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 LIN9Q5TKA1 542 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 ASTLQ6HA08 431 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 GRASPQ7Z6J2 395 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 ALYREFQ86V81 257 aaKnown RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 GPBP1Q86WP2 473 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 C18orf25Q96B23 403 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 CLIC4Q9Y696 253 aa14.31□□□□□ -0.12
SEMA4D-223ENST00000540475 A0A0B4J269 797 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 I3L4J1 428 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 GALR2O43603 387 aaPredicted RBP14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 TRAK2O60296 914 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 SRFP11831 508 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 FSHRP23945 695 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 AARSP49588 968 aaKnown RBP eCLIP14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 MRE11P49959 708 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 POU5F1Q01860 360 aaKnown RBP14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 ROR1Q01973 937 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 MCM6Q14566 821 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 SEZ6Q53EL9 994 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 CWF19L1Q69YN2 538 aaKnown RBP14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 USP49Q70CQ1 688 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 MYCT1Q8N699 235 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 EPSTI1Q96J88 318 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 STRA6Q9BX79 667 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 SLC2A4RGQ9NR83 387 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 ANKFY1Q9P2R3 1169 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 CDH7Q9ULB5 785 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 KCNH3Q9ULD8 1083 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 MAFFQ9ULX9 164 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 STYXL1Q9Y6J8 313 aa14.3□□□□□ -0.12
SEMA4D-223ENST00000540475 WDR27A2RRH5 827 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 VPS37CA5D8V6 355 aaPredicted RBP14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 H7C4K7 107 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 M0QZQ0 153 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 OGTO15294 1046 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 NARSO43776 548 aaKnown RBP14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 XYLBO75191 536 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 CXCL8P10145 99 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 ATF2P15336 505 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 AOC1P19801 751 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 ENOX2Q16206 610 aaKnown RBP14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 TPGS2Q68CL5 300 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 SLC39A4Q6P5W5 647 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 MAP4K3Q8IVH8 894 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 TCEAL8Q8IYN2 117 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 DNMT3BQ9UBC3 853 aaKnown RBP14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 STK17AQ9UEE5 414 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 SCN1AP35498 2009 aa14.29□□□□□ -0.12
SEMA4D-223ENST00000540475 CCL16O15467 120 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 PPP1R37O75864 691 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 MICAL2O94851 1124 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 FAM13AO94988 1023 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 OAZ2O95190 189 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 HARSP12081 509 aaKnown RBP14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 PAX3P23760 479 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 TNFSF9P41273 254 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 LIG4P49917 911 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 NTHL1P78549 312 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 GET4Q7L5D6 327 aaPredicted RBP14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 ZNF720Q7Z2F6 126 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 CD302Q8IX05 232 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 BEST2Q8NFU1 509 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 DDX12PQ92771 950 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 FGF13Q92913 245 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 PHOX2BQ99453 314 aa14.28□□□□□ -0.12
SEMA4D-223ENST00000540475 OXCT2Q9BYC2 517 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms