RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 SLC35G2Q8TBE7 412 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 AFG1LQ8WV93 481 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 MIEF2Q96C03 454 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 NLRP4Q96MN2 994 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 THAP2Q9H0W7 228 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 TSPYL2Q9H2G4 693 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-212ENST00000540304 CPSF2Q9P2I0 782 aaKnown RBP10.35□□□□□ -0.75
CLIP1-212ENST00000540304 EVPLQ92817 2033 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 TRPM7Q96QT4 1865 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 CEP350Q5VT06 3117 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 COL1A2P08123 1366 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 FAM189A1O60320 539 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 RTN2O75298 545 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 KIF4AO95239 1232 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 MYBL2P10244 700 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 GZMAP12544 262 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 CLCN3P51790 818 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 AP3M2P53677 418 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 VSNL1P62760 191 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 CDR2Q01850 454 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 GRM1Q13255 1194 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 PEX26Q7Z412 305 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
CLIP1-212ENST00000540304 ACKR2O00590 384 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 OGTO15294 1046 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 MAGEB2O15479 319 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 AP1G2O75843 785 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 VNN1O95497 513 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 FTLP02792 175 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-212ENST00000540304 GJB1P08034 283 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 KRT5P13647 590 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 INSRRP14616 1297 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 PTENP60484 403 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 MCL1Q07820 350 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 TBC1D25Q3MII6 688 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 SEZ6Q53EL9 994 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 DAAM2Q86T65 1068 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 RHOT2Q8IXI1 618 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 CCDC26Q8TAB7 109 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 DHX38Q92620 1227 aaKnown RBP10.34□□□□□ -0.75
CLIP1-212ENST00000540304 ARHGEF26Q96DR7 871 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 MS4A14Q96JA4 679 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 PCDHB18PQ96TA0 734 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 NFKBIZQ9BYH8 718 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 ABHD16BQ9H3Z7 469 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 FZD8Q9H461 694 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 OSGEPQ9NPF4 335 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-212ENST00000540304 SLC15A5A6NIM6 579 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 INO80B-WBP1J3KQ70 363 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 ABLIM1O14639 778 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 KCNK3O14649 394 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 PPFIA4O75335 1185 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 MMEP08473 750 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 ZNF286BP0CG31 522 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 PROZP22891 400 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 TNFSF9P41273 254 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
CLIP1-212ENST00000540304 IGBP1P78318 339 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 FMO1Q01740 532 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 LONRF2Q1L5Z9 754 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 CST9Q5W186 159 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 MPZL3Q6UWV2 235 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 NT5DC3Q86UY8 548 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 WDR49Q8IV35 697 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 PBKQ96KB5 322 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 TINF2Q9BSI4 451 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 C16orf70Q9BSU1 422 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 INO80BQ9C086 356 aaPredicted RBP10.34□□□□□ -0.75
CLIP1-212ENST00000540304 ACP6Q9NPH0 428 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 SLC5A4Q9NY91 659 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 CWC15Q9P013 229 aaKnown RBP10.34□□□□□ -0.75
CLIP1-212ENST00000540304 STXBP5LQ9Y2K9 1186 aa10.34□□□□□ -0.75
CLIP1-212ENST00000540304 BUB1BO60566 1050 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-212ENST00000540304 PPFIA2O75334 1257 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 ZMYND10O75800 440 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 HUNKP57058 714 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 GPC5P78333 572 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 MBTD1Q05BQ5 628 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 POU5F1BQ06416 359 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 ACVR2BQ13705 512 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 SURF1Q15526 300 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 DUSP28Q4G0W2 176 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 ATF7IP2Q5U623 682 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 NME8Q8N427 588 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 OR5B17Q8NGF7 314 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 DDX1Q92499 740 aaKnown RBP10.33□□□□□ -0.76
CLIP1-212ENST00000540304 ZBTB10Q96DT7 871 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 ZNF668Q96K58 619 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-212ENST00000540304 PTPRHQ9HD43 1115 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 CPSF3Q9UKF6 684 aaKnown RBP10.33□□□□□ -0.76
CLIP1-212ENST00000540304 PHACTR2O75167 634 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 TBC1D8O95759 1140 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 SMPD1P17405 629 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 PHKA2P46019 1235 aa10.33□□□□□ -0.76
CLIP1-212ENST00000540304 ZNF568Q3ZCX4 644 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms