RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 COQ6Q9Y2Z9 468 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 CHRNA3P32297 505 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 MYL7Q01449 175 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 GEN1Q17RS7 908 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 GSTCDQ8NEC7 633 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
PBX1-212ENST00000540236 APOBEC2Q9Y235 224 aaKnown RBP11.68□□□□□ -0.54
PBX1-212ENST00000540236 CDC42BPBQ9Y5S2 1711 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 MFN2O95140 757 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 CEP55Q53EZ4 464 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
PBX1-212ENST00000540236 PASD1Q8IV76 773 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ZSWIM2Q8NEG5 633 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 THAP2Q9H0W7 228 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 MARCH7Q9H992 704 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ERVK-5Q9HDB9 667 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
PBX1-212ENST00000540236 ANKRD33BA6NCL7 494 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 SNAP23O00161 211 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 WFS1O76024 890 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ENO2P09104 434 aaPredicted RBP11.68□□□□□ -0.54
PBX1-212ENST00000540236 GNAZP19086 355 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 SERPINB5P36952 375 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ZFAND2BQ8WV99 257 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 DNAJC12Q9UKB3 198 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 PRLRP16471 622 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 CASP5P51878 434 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 SUN5Q8TC36 379 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 TMEM79Q9BSE2 394 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
PBX1-212ENST00000540236 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
PBX1-212ENST00000540236 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 H3BSA7 217 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 FTLP02792 175 aaPredicted RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 EIF2AK2P19525 551 aaKnown RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 PABPC4Q13310 644 aaKnown RBP eCLIP11.67□□□□□ -0.54
PBX1-212ENST00000540236 CHI3L2Q15782 390 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 C2CD6Q53TS8 623 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 ACSBG2Q5FVE4 666 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 C4orf50Q6ZRC1 276 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 CKAP2Q8WWK9 683 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 RBM15Q96T37 977 aaKnown RBP eCLIP11.67□□□□□ -0.54
PBX1-212ENST00000540236 RAB20Q9NX57 234 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 WNT7AO00755 349 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 TSPAN9O75954 239 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 NKX2-5P52952 324 aaPredicted RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 SLC5A3P53794 718 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 DHX34Q14147 1143 aaKnown RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 ARID3BQ8IVW6 561 aaPredicted RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 SCYL1Q96KG9 808 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 CAB39Q9Y376 341 aaPredicted RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 MYO3BQ8WXR4 1341 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 SALL1Q9NSC2 1324 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 E9PMD0 336 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 FAM58BPP0C7Q3 252 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 PRKCIP41743 596 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 ATG14Q6ZNE5 492 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 SLC4A11Q8NBS3 891 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 HDAC2Q92769 488 aaKnown RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 INPP5DQ92835 1189 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 CADM1Q9BY67 442 aaKnown RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 DKK3Q9UBP4 350 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 C15orf38-AP3S2A0A0A6YYH1 394 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 RNF43Q68DV7 783 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 ZNF571Q7Z3V5 609 aaPredicted RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 ARPINQ7Z6K5 226 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 RANBP17Q9H2T7 1088 aaKnown RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 SLC12A6Q9UHW9 1150 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 MYH8P13535 1937 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 AGLP35573 1532 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 CAPN8A6NHC0 703 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 IRS4O14654 1257 aaPredicted RBP11.67□□□□□ -0.54
PBX1-212ENST00000540236 CCDC130P13994 396 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 CENPTQ96BT3 561 aa11.67□□□□□ -0.54
PBX1-212ENST00000540236 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
PBX1-212ENST00000540236 PSMC3P17980 439 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 RPL13P26373 211 aaKnown RBP11.66□□□□□ -0.54
PBX1-212ENST00000540236 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
PBX1-212ENST00000540236 MMP13P45452 471 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 FOXB2Q5VYV0 432 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 IL31Q6EBC2 164 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 PDXDC2PQ6P474 469 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 SNX25Q9H3E2 840 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 UMODL1Q5DID0 1318 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 UNCXA6NJT0 531 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 A6NL46 340 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 A8MU76 341 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 LMNB2Q03252 620 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 PLEKHG1Q9ULL1 1385 aa11.66□□□□□ -0.54
PBX1-212ENST00000540236 FCHO1O14526 889 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms