RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ZCWPW2Q504Y3 356 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 C1orf146Q5VVC0 180 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 ZC3H3Q8IXZ2 948 aaKnown RBP6.4□□□□□ -1.38
PTPRD-214ENST00000540109 JDP2Q8WYK2 163 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 CMTM5Q96DZ9 223 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 MED15Q96RN5 788 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 RANBP17Q9H2T7 1088 aaKnown RBP6.4□□□□□ -1.38
PTPRD-214ENST00000540109 PANK4Q9NVE7 773 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 TEKT2Q9UIF3 430 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 ATP6V1B1P15313 513 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 KCNA2P16389 499 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 MTTPP55157 894 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 ARPC4P59998 168 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 CDR2Q01850 454 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 BMT2Q1RMZ1 405 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 SFMBT2Q5VUG0 894 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 DCAF15Q66K64 600 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.38
PTPRD-214ENST00000540109 SMYD3Q9H7B4 428 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 IFT122Q9HBG6 1241 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 EURLQ9NYK6 297 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 LRCH1Q9Y2L9 728 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 COPG1Q9Y678 874 aaKnown RBP6.4□□□□□ -1.38
PTPRD-214ENST00000540109 POTEFA5A3E0 1075 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 C16orf96A6NNT2 1141 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 TDP2O95551 362 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 PLA2G4BP0C869 781 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 POTEIP0CG38 1075 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 BCRP11274 1271 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 CPA3P15088 417 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-214ENST00000540109 RGS2P41220 211 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 NFIAQ12857 509 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 MED21Q13503 144 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 ATP1A4Q13733 1029 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 ASIC2Q16515 512 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 LIN9Q5TKA1 542 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 TRIM65Q6PJ69 517 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 TRAF7Q6Q0C0 670 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 CRYGNQ8WXF5 182 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 LRGUKQ96M69 825 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 RIT2Q99578 217 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 SPC25Q9HBM1 224 aa6.4□□□□□ -1.38
PTPRD-214ENST00000540109 RSL24D1Q9UHA3 163 aaKnown RBP6.4□□□□□ -1.38
PTPRD-214ENST00000540109 SSU72P8A0A1W2PR75 194 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 RSPH10B2B2RC85 870 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 PDXKO00764 312 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 WFS1O76024 890 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 EYA4O95677 639 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 RSPH10BP0C881 870 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 RFX1P22670 979 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 GSTT1P30711 240 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 AOC3Q16853 763 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 CCDC153Q494R4 210 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 MMGT1Q8N4V1 131 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 RDM1Q8NG50 284 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 PPWD1Q96BP3 646 aaKnown RBP6.4□□□□□ -1.39
PTPRD-214ENST00000540109 GMLQ99445 158 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 PRMT1Q99873 361 aaKnown RBP6.4□□□□□ -1.39
PTPRD-214ENST00000540109 AZI2Q9H6S1 392 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 AS3MTQ9HBK9 375 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 ZFP69BQ9UJL9 534 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 RAB21Q9UL25 225 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 SMG5Q9UPR3 1016 aaKnown RBP6.4□□□□□ -1.39
PTPRD-214ENST00000540109 CCDC166P0CW27 439 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 MAPTP10636 758 aaKnown RBP6.4□□□□□ -1.39
PTPRD-214ENST00000540109 ILF2Q12905 390 aaKnown RBP6.4□□□□□ -1.39
PTPRD-214ENST00000540109 COASYQ13057 564 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 FSCBQ5H9T9 825 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 ZBTB41Q5SVQ8 909 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 KCTD1Q719H9 257 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 TRPM8Q7Z2W7 1104 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 FRMD5Q7Z6J6 570 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 TLK2Q86UE8 772 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 RFWD2Q8NHY2 731 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 MKNK1Q9BUB5 465 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 DNAJC18Q9H819 358 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 DNAAF2Q9NVR5 837 aaKnown RBP6.4□□□□□ -1.39
PTPRD-214ENST00000540109 TMEM260Q9NX78 707 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 BLOC1S6Q9UL45 172 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 PPP2R3BQ9Y5P8 575 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 GMEB1Q9Y692 573 aa6.4□□□□□ -1.39
PTPRD-214ENST00000540109 SLX4Q8IY92 1834 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 A0A0G2JND7 137 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 DDTLA6NHG4 134 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-214ENST00000540109 GOLGA8MH3BSY2 632 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 PSMD14O00487 310 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 TEX33O43247 280 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 SLC37A4O43826 429 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 NDUFA10O95299 355 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 EPB41P11171 864 aaKnown RBP6.39□□□□□ -1.39
PTPRD-214ENST00000540109 MTF1Q14872 753 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 TRIM16LQ309B1 348 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 MMEL1Q495T6 779 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 GPBP1Q86WP2 473 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 ICA1LQ8NDH6 482 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 DDHD1Q8NEL9 900 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 APBB2Q92870 758 aa6.39□□□□□ -1.39
PTPRD-214ENST00000540109 LRRC37BQ96QE4 947 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms