RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 RNF149Q8NC42 400 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 ST13P5Q8NFI4 369 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CCDC148Q8NFR7 591 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 LNX1Q8TBB1 728 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 PIK3R5Q8WYR1 880 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 FAM3CQ92520 227 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 IRF7Q92985 503 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 ELSPBP1Q96BH3 223 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 MCRS1Q96EZ8 462 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CEP170P1Q96L14 293 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 KXD1Q9BQD3 176 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SH2D3AQ9BRG2 576 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 TRMT61BQ9BVS5 477 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CCDC94Q9BW85 323 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 DHX33Q9H6R0 707 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 TMEM134Q9H6X4 195 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 BRD9Q9H8M2 597 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 MINDY3Q9H8M7 445 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 ZFP14Q9HCL3 533 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 TRPV5Q9NQA5 729 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 AVENQ9NQS1 362 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SH3GLB2Q9NR46 395 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 HEBP1Q9NRV9 189 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 DNMT3BQ9UBC3 853 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 MRPS23Q9Y3D9 190 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CFAP47Q6ZTR5 3102 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 DENND4AQ7Z401 1863 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SF3B1O75533 1304 aaKnown RBP eCLIP6.58□□□□□ -1.367e-6■■■■■ 28.7
CPSF7-219ENST00000539952 KLF18A0A0U1RQI7 1052 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 ZNF197O14709 1029 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 TM4SF5O14894 197 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 CCL16O15467 120 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 HRO43593 1189 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 EDIL3O43854 480 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 PROS1P07225 676 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 TDGF1P13385 188 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 PMLP29590 882 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 NTHL1P78549 312 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 FGD1P98174 961 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 GRIK3Q13003 919 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 TUSC3Q13454 348 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 KRT32Q14532 448 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 PSMD5Q16401 504 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 LPAL2Q16609 132 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 FAM171A1Q5VUB5 890 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 TANGO2Q6ICL3 276 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 PRSS55Q6UWB4 352 aaPredicted RBP6.58□□□□□ -1.36
CPSF7-219ENST00000539952 LONP2Q86WA8 852 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 C4orf19Q8IY42 314 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 PDCL2Q8N4E4 241 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 SPEM1Q8N4L4 309 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 GSTCDQ8NEC7 633 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 ITFG1Q8TB96 612 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 TBCKQ8TEA7 893 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 TMEM143Q96AN5 459 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 LOXL4Q96JB6 756 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 B3GALT6Q96L58 329 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 FAM20AQ96MK3 541 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 ZFP42Q96MM3 310 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 EIF2AQ9BY44 585 aaKnown RBP6.58□□□□□ -1.36
CPSF7-219ENST00000539952 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 GTPBP4Q9BZE4 634 aaKnown RBP6.58□□□□□ -1.36
CPSF7-219ENST00000539952 TM6SF1Q9BZW5 370 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 ANO2Q9NQ90 1003 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 PARP2Q9UGN5 583 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 NDRG2Q9UN36 371 aaKnown RBP6.58□□□□□ -1.36
CPSF7-219ENST00000539952 LIMCH1Q9UPQ0 1083 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 DMXL1Q9Y485 3027 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 F5P12259 2224 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 C2orf16Q68DN1 1984 aa6.58□□□□□ -1.36
CPSF7-219ENST00000539952 MTCL1Q9Y4B5 1905 aaKnown RBP6.58□□□□□ -1.36
CPSF7-219ENST00000539952 ZMYM2Q9UBW7 1377 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 A0A1B0GUA9 196 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 TMEM150BA6NC51 233 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 BHMG1C9JSJ3 638 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 F8W810 466 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 INO80B-WBP1J3KQ70 363 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 TRAPPC3O43617 180 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 TSPAN1O60635 241 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 PAPSS2O95340 614 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 THP07101 528 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 ZNF806P0C7X5 589 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 ZSCAN22P10073 491 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 PSMC3P17980 439 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 PDCP20941 246 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 AKAP5P24588 427 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 HOXA6P31267 233 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 ELF1P32519 619 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 OR1D2P34982 312 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 NPEPPSP55786 919 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 NLRP5P59047 1200 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 LSM11P83369 360 aaKnown RBP eCLIP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 DHX8Q14562 1220 aaKnown RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 EPHA7Q15375 998 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 DGKKQ5KSL6 1271 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 RTP2Q5QGT7 225 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 SLC27A1Q6PCB7 646 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms