RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RUNDC3BQ96NL0 473 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF317Q96PQ6 595 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 SPZ1Q9BXG8 430 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 SEZ6LQ9BYH1 1024 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ROPN1BQ9BZX4 212 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 TRIM6Q9C030 488 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 NSRP1Q9H0G5 558 aaKnown RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 RAB17Q9H0T7 212 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 KANSL2Q9H9L4 492 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 ROPN1Q9HAT0 212 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 C6orf50Q9HD87 102 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 PPANQ9NQ55 473 aaKnown RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 FAM207AQ9NSI2 230 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCDC60-204ENST00000539847 NENFQ9UMX5 172 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 SLC12A4Q9UP95 1085 aa8.23□□□□□ -1.09
CCDC60-204ENST00000539847 STXBP3O00186 592 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TNFRSF10AO00220 468 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 VWA5AO00534 786 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 MPHOSPH10O00566 681 aaKnown RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ABLIM1O14639 778 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ATP2A1O14983 1001 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 EPHB6O15197 1021 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 NCK2O43639 380 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 LILRA1O75019 489 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 WFS1O76024 890 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ATP6V1G2O95670 118 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 AGTP01019 485 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TIMP1P01033 207 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF865P0CJ78 1059 aaPredicted RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 KLRC1P26715 233 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 CXCR5P32302 372 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 STAT3P40763 770 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 SKIV2L2P42285 1042 aaKnown RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 GUCY2FP51841 1108 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 NKX3-2P78367 333 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 POU5F1Q01860 360 aaKnown RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 GFPT1Q06210 699 aaPredicted RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 PPIGQ13427 754 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TCEAL1Q15170 157 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 EDRF1Q3B7T1 1238 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ODF2Q5BJF6 829 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TNFAIP8L3Q5GJ75 292 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 HYIQ5T013 277 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 RASIP1Q5U651 963 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 LRCH2Q5VUJ6 765 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TMC3Q7Z5M5 1100 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 NEK8Q86SG6 692 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 SIAH1Q8IUQ4 282 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC63Q8NA47 563 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 PCSK9Q8NBP7 692 aaKnown RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 KLHDC9Q8NEP7 349 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ATG4CQ96DT6 458 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 MS4A14Q96JA4 679 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 MTMR9Q96QG7 549 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 MMP19Q99542 508 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 NAP1L4Q99733 375 aaKnown RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 MMTAG2Q9BU76 263 aaKnown RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 PRKD2Q9BZL6 878 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ZNF576Q9H609 170 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 ETNK1Q9HBU6 452 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 NOD2Q9HC29 1040 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 KCNMB3Q9NPA1 279 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TMEM39AQ9NV64 488 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 PARP2Q9UGN5 583 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 TBX21Q9UL17 535 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 PPP1R9AQ9ULJ8 1098 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 SYNPO2Q9UMS6 1093 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 UTP11Q9Y3A2 253 aaKnown RBP8.22□□□□□ -1.09
CCDC60-204ENST00000539847 BDP1A6H8Y1 2624 aa8.22□□□□□ -1.09
CCDC60-204ENST00000539847 PIEZO1Q92508 2521 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 E7ENQ6 273 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 F8VZ95 297 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 PQBP1O60828 265 aaKnown RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 DUSP11O75319 330 aaKnown RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 ITGB8P26012 769 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 ACLYP53396 1101 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 CLNS1AP54105 237 aaKnown RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 PLCB3Q01970 1234 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 KLHL30Q0D2K2 578 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 FAAP100Q0VG06 881 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 GRB10Q13322 594 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 DHX34Q14147 1143 aaKnown RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 HLTFQ14527 1009 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 PLS1Q14651 629 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 ASIC2Q16515 512 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 TMEM266Q2M3C6 531 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 GALNTL6Q49A17 601 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 TMEM119Q4V9L6 283 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 CCDC38Q502W7 563 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 KIAA1755Q5JYT7 1200 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 PRAMEF19Q5SWL8 479 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 PPP1R26Q5T8A7 1209 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 C12orf60Q5U649 245 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 CCSAPQ6IQ19 270 aaPredicted RBP8.21□□□□□ -1.1
CCDC60-204ENST00000539847 MFSD5Q6N075 450 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 ALKBH2Q6NS38 261 aa8.21□□□□□ -1.1
CCDC60-204ENST00000539847 C16orf46Q6P387 395 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms