RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 MAP2K7O14733 419 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 CEP104O60308 925 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 BUB1BO60566 1050 aaPredicted RBP10.89□□□□□ -0.67
SPARC-209ENST00000539687 TBC1D8O95759 1140 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 LSM8O95777 96 aaKnown RBP10.89□□□□□ -0.67
SPARC-209ENST00000539687 SNAI1O95863 264 aaPredicted RBP10.89□□□□□ -0.67
SPARC-209ENST00000539687 ASS1P00966 412 aaKnown RBP10.89□□□□□ -0.67
SPARC-209ENST00000539687 MMP3P08254 477 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 P4HA1P13674 534 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 ATICP31939 592 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 NSFP46459 744 aaKnown RBP10.89□□□□□ -0.67
SPARC-209ENST00000539687 EPHB4P54760 987 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 PPFIA1Q13136 1202 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 MAP2K5Q13163 448 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 PAK2Q13177 524 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 DCAF4L1Q3SXM0 396 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 HSP90B2PQ58FF3 399 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 CCNI2Q6ZMN8 369 aaPredicted RBP10.89□□□□□ -0.67
SPARC-209ENST00000539687 SLC47A2Q86VL8 602 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 LRRC71Q8N4P6 559 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 LINC01465Q8N7H1 131 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 SLC20A1Q8WUM9 679 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 ZNF516Q92618 1163 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 COPS5Q92905 334 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 ZNF653Q96CK0 615 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 KATNAL1Q9BW62 490 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 FUT8Q9BYC5 575 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 ZNF518BQ9C0D4 1074 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 DNAI2Q9GZS0 605 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 MED4Q9NPJ6 270 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 PRDM10Q9NQV6 1147 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 ZHX1Q9UKY1 873 aaPredicted RBP10.89□□□□□ -0.67
SPARC-209ENST00000539687 L1RE1Q9UN81 338 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 PCDHB4Q9Y5E5 795 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 SCINQ9Y6U3 715 aa10.89□□□□□ -0.67
SPARC-209ENST00000539687 ABLIM1O14639 778 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 MED7O43513 233 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 FAM189A1O60320 539 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 ERLIN2O94905 339 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 MMEP08473 750 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 HARSP12081 509 aaKnown RBP10.88□□□□□ -0.67
SPARC-209ENST00000539687 UNGP13051 313 aaPredicted RBP10.88□□□□□ -0.67
SPARC-209ENST00000539687 CHRNB2P17787 502 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 CTNNA2P26232 953 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 GNA15P30679 374 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 CXCR5P32302 372 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 GBP1P32455 592 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 ADCYAP1R1P41586 468 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 CPT1AP50416 773 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 NUBP1P53384 320 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 HUNKP57058 714 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 CENPCQ03188 943 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 TAP1Q03518 808 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 DRP2Q13474 957 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 CUL1Q13616 776 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 SEL1L2Q5TEA6 688 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 TAF3Q5VWG9 929 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 OLFML2BQ68BL8 750 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 MTHFD1LQ6UB35 978 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 ZBTB33Q86T24 672 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 ZNF564Q8TBZ8 553 aaPredicted RBP10.88□□□□□ -0.67
SPARC-209ENST00000539687 MAIP1Q8WWC4 291 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 DDX1Q92499 740 aaKnown RBP10.88□□□□□ -0.67
SPARC-209ENST00000539687 KAT5Q92993 513 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 TATDN2Q93075 761 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 ZBTB45Q96K62 511 aaPredicted RBP10.88□□□□□ -0.67
SPARC-209ENST00000539687 PSMB7Q99436 277 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 C16orf70Q9BSU1 422 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 HAPLN2Q9GZV7 340 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 EPC1Q9H2F5 836 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 RNPEPQ9H4A4 650 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPARC-209ENST00000539687 TMEM59LQ9UK28 342 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 AKT3Q9Y243 479 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPARC-209ENST00000539687 ZSWIM8A7E2V4 1837 aa10.88□□□□□ -0.67
SPARC-209ENST00000539687 ZNFX1Q9P2E3 1918 aaKnown RBP10.88□□□□□ -0.67
SPARC-209ENST00000539687 NRCAMQ92823 1304 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 KRIT1O00522 736 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 KPNA6O60684 536 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 VNN1O95497 513 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 CYP1A1P04798 512 aaPredicted RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 RPLP2P05387 115 aaKnown RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 ACO1P21399 889 aaKnown RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 RGS2P41220 211 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 CLCN3P51790 818 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 SREBF2Q12772 1141 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 CASP8Q14790 479 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 GRIK4Q16099 956 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 ZNF699Q32M78 642 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 MORN1Q5T089 497 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 PHF13Q86YI8 300 aaPredicted RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 EFCAB13Q8IY85 973 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 RBBP8NLQ8NC74 664 aaPredicted RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 WHAMMQ8TF30 809 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 CAVIN3Q969G5 261 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms