RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PTMSP20962 102 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 RPL13P26373 211 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 LRPAP1P30533 357 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 RPL9P32969 192 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 IRS1P35568 1242 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 ERVFC1P60507 584 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 TFAMQ00059 246 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 UBE3AQ05086 875 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 LRRC63Q05C16 580 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 PTPRJQ12913 1337 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 ADAM9Q13443 819 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 PSMD6Q15008 389 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 SURF1Q15526 300 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 SZT2Q5T011 3432 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 DCLRE1AQ6PJP8 1040 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 TAS1R1Q7RTX1 841 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 DDX53Q86TM3 631 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 PLEKHO2Q8TD55 490 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 MRPL38Q96DV4 380 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 DDX27Q96GQ7 796 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 DPP3Q9NY33 737 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 PUF60Q9UHX1 559 aaKnown RBP13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 ADAM28Q9UKQ2 775 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 LZTS1Q9Y250 596 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 FRMD4BQ9Y2L6 1034 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 PCDHGC5Q9Y5F6 944 aa13.77□□□□□ -0.21
TSPAN9-207ENST00000539631 SCN1AP35498 2009 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 CETN3O15182 167 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 B3GAT3O94766 335 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 FOSL2P15408 326 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 POU3F3P20264 500 aaPredicted RBP13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 BRCC3P46736 316 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 PAK1Q13153 545 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 PTPROQ16827 1216 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 KLHL40Q2TBA0 621 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 DPCR1Q3MIW9 517 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 TTI2Q6NXR4 508 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 NT5DC4Q86YG4 428 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 ZC3H3Q8IXZ2 948 aaKnown RBP13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 VPS52Q8N1B4 723 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 MLKLQ8NB16 471 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 OR5B17Q8NGF7 314 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 FNBP1Q96RU3 617 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 POP1Q99575 1024 aaKnown RBP13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 CGRRF1Q99675 332 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 GPR62Q9BZJ7 368 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 GZF1Q9H116 711 aaPredicted RBP13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 ZBP1Q9H171 429 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 TLR9Q9NR96 1032 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 INTS13Q9NVM9 706 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 LMCD1Q9NZU5 365 aa13.76□□□□□ -0.21
TSPAN9-207ENST00000539631 MYO9BQ13459 2157 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 BICDL2A1A5D9 508 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 LRRIQ3A6PVS8 624 aaPredicted RBP13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 I3L4J1 428 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 PPEF2O14830 753 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 FSCN2O14926 492 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 TMEM191BP0C7N4 346 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 TNNI1P19237 187 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 PSMC2P35998 433 aaKnown RBP13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 DLG4P78352 724 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 FKBP3Q00688 224 aaKnown RBP13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 PLPP4Q5VZY2 271 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 TMC7Q7Z402 723 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 WDR49Q8IV35 697 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 FAM186BQ8IYM0 893 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 MICALL1Q8N3F8 863 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 C1orf127Q8N9H9 656 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 MICAL1Q8TDZ2 1067 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 PARD3BQ8TEW8 1205 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 CACTINQ8WUQ7 758 aaKnown RBP13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 ZNF516Q92618 1163 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 ANKRD36BP1Q96IX9 119 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 MTMR12Q9C0I1 747 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 ENTPD7Q9NQZ7 604 aa13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.75□□□□□ -0.21
TSPAN9-207ENST00000539631 CUL9Q8IWT3 2517 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 CDH23Q9H251 3354 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 ANO9A1A5B4 782 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 PIRO00625 290 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 MAPK13O15264 365 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 SOD2P04179 222 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 ITGB3P05106 788 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 CTSAP10619 480 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 FOXR2Q6PJQ5 311 aa13.74□□□□□ -0.21
TSPAN9-207ENST00000539631 SASS6Q6UVJ0 657 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms