RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 MIER3Q7Z3K6 550 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 MAB21L3Q8N8X9 362 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 MORC4Q8TE76 937 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 FBXO41Q8TF61 875 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 DDX1Q92499 740 aaKnown RBP21.6■■□□□ 1.05
TMEM260-203ENST00000539559 ZNF277Q9NRM2 450 aaPredicted RBP21.6■■□□□ 1.05
TMEM260-203ENST00000539559 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.6■■□□□ 1.05
TMEM260-203ENST00000539559 ZHX2Q9Y6X8 837 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 CCDC189A1A4V9 331 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 ATP5DP30049 168 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 ADSSP30520 456 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 PTK6Q13882 451 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 GBP7Q8N8V2 638 aaPredicted RBP21.6■■□□□ 1.05
TMEM260-203ENST00000539559 IL31RAQ8NI17 732 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 ERP27Q96DN0 273 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 SPDL1Q96EA4 605 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 SLC5A4Q9NY91 659 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 UVRAGQ9P2Y5 699 aa21.6■■□□□ 1.05
TMEM260-203ENST00000539559 MROH7Q68CQ1 1323 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 RAD17O75943 681 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 SSR1P43307 286 aaKnown RBP21.59■■□□□ 1.05
TMEM260-203ENST00000539559 SNRNP35Q16560 246 aaKnown RBP21.59■■□□□ 1.05
TMEM260-203ENST00000539559 ANKRD20A2Q5SQ80 823 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 ANKRD20A1Q5TYW2 823 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 ANKRD20A3Q5VUR7 823 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 ACAD10Q6JQN1 1059 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 GLIS1Q8NBF1 620 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 MICAL1Q8TDZ2 1067 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 IFT74Q96LB3 600 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 MAGEB18Q96M61 343 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 TMEM206Q9H813 350 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 HAO1Q9UJM8 370 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 SOX10P56693 466 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 SLC8A3P57103 927 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 LACTBP83111 547 aaPredicted RBP21.59■■□□□ 1.05
TMEM260-203ENST00000539559 MTFR1Q15390 333 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 IZUMO3Q5VZ72 239 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 VPS33BQ9H267 617 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 ZMYND8Q9ULU4 1186 aaPredicted RBP21.59■■□□□ 1.05
TMEM260-203ENST00000539559 USTQ9Y2C2 406 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 ATRNL1Q5VV63 1379 aa21.59■■□□□ 1.05
TMEM260-203ENST00000539559 POC1B-GALNT4F8VUJ3 575 aa21.58■■□□□ 1.05
TMEM260-203ENST00000539559 PIAS1O75925 651 aa21.58■■□□□ 1.05
TMEM260-203ENST00000539559 VIL1P09327 827 aaKnown RBP21.58■■□□□ 1.05
TMEM260-203ENST00000539559 SPP2Q13103 211 aa21.58■■□□□ 1.05
TMEM260-203ENST00000539559 LMBRD2Q68DH5 695 aaPredicted RBP21.58■■□□□ 1.05
TMEM260-203ENST00000539559 ZNF449Q6P9G9 518 aa21.58■■□□□ 1.05
TMEM260-203ENST00000539559 C4orf33Q8N1A6 199 aa21.58■■□□□ 1.05
TMEM260-203ENST00000539559 OGFOD1Q8N543 542 aa21.58■■□□□ 1.05
TMEM260-203ENST00000539559 TMOD2Q9NZR1 351 aa21.58■■□□□ 1.05
TMEM260-203ENST00000539559 GAS8O95995 478 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 ZSCAN5DPP0CG00 497 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 CHRM1P11229 460 aaPredicted RBP21.58■■□□□ 1.04
TMEM260-203ENST00000539559 ATP2A2P16615 1042 aaKnown RBP21.58■■□□□ 1.04
TMEM260-203ENST00000539559 CD58P19256 250 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 RARRES1P49788 294 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 CCNHP51946 323 aaPredicted RBP21.58■■□□□ 1.04
TMEM260-203ENST00000539559 ATP11AP98196 1134 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 PLA2G4FQ68DD2 849 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 NAIF1Q69YI7 327 aaPredicted RBP21.58■■□□□ 1.04
TMEM260-203ENST00000539559 TRIM68Q6AZZ1 485 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 ARHGEF18Q6ZSZ5 1173 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 VSIG1Q86XK7 387 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 SLCO2A1Q92959 643 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 TRAIPQ9BWF2 469 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 KCND2Q9NZV8 630 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 GRID1Q9ULK0 1009 aa21.58■■□□□ 1.04
TMEM260-203ENST00000539559 UNC5CO95185 931 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 CFHP08603 1231 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 PLS3P13797 630 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 PEX19P40855 299 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 FASTKD3Q14CZ7 662 aaKnown RBP21.57■■□□□ 1.04
TMEM260-203ENST00000539559 B3GNT9Q6UX72 402 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 PASD1Q8IV76 773 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.57■■□□□ 1.04
TMEM260-203ENST00000539559 P4HA2O15460 535 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 UGCGQ16739 394 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 POMGNT1Q8WZA1 660 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 DDX27Q96GQ7 796 aaKnown RBP21.57■■□□□ 1.04
TMEM260-203ENST00000539559 CSRNP1Q96S65 589 aa21.57■■□□□ 1.04
TMEM260-203ENST00000539559 SPDYE2BA6NHP3 402 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 CDH16O75309 829 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 MYCNP04198 464 aaPredicted RBP21.56■■□□□ 1.04
TMEM260-203ENST00000539559 SPDYE6P0CI01 402 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 ETS1P14921 441 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 ABL2P42684 1182 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 TAS2R40P59535 323 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 STRN3Q13033 797 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 CLEC16AQ2KHT3 1053 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 FAM102BQ5T8I3 360 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 ZNF365Q70YC5 407 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 GSTA5Q7RTV2 222 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 LBHD1Q9BQE6 289 aaPredicted RBP21.56■■□□□ 1.04
TMEM260-203ENST00000539559 KCNH7Q9NS40 1196 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 CHKBQ9Y259 395 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 USP20Q9Y2K6 914 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 PI4K2BG5E9Z4 385 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 ATP13A4Q4VNC1 1196 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 KAZNQ674X7 775 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 KRT39Q6A163 491 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms