RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SLC38A7Q9NVC3 462 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
RPAIN-206ENST00000539417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-206ENST00000539417 TMEM189-UBE2V1I3L0A0 370 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 BIN1O00499 593 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 CD44P16070 742 aaKnown RBP17.09■□□□□ 0.33
RPAIN-206ENST00000539417 LRPAP1P30533 357 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 PRCPP42785 496 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 CASP4P49662 377 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 SMC1AQ14683 1233 aaKnown RBP17.09■□□□□ 0.33
RPAIN-206ENST00000539417 COL19A1Q14993 1142 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 TMEM132DQ14C87 1099 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 DUSP6Q16828 381 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 CTC1Q2NKJ3 1217 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 PRSS55Q6UWB4 352 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-206ENST00000539417 C12orf56Q8IXR9 622 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 CCDC47Q96A33 483 aaKnown RBP17.09■□□□□ 0.33
RPAIN-206ENST00000539417 UROC1Q96N76 676 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 ASB7Q9H672 318 aa17.09■□□□□ 0.33
RPAIN-206ENST00000539417 NGRNQ9NPE2 291 aaKnown RBP17.09■□□□□ 0.33
RPAIN-206ENST00000539417 UBQLN1Q9UMX0 589 aaKnown RBP17.09■□□□□ 0.33
RPAIN-206ENST00000539417 C5orf42Q9H799 3197 aa17.08■□□□□ 0.33
RPAIN-206ENST00000539417 A0A0C4DFX4 3053 aa17.08■□□□□ 0.33
RPAIN-206ENST00000539417 CLASP2O75122 1294 aaKnown RBP17.08■□□□□ 0.32
RPAIN-206ENST00000539417 TBX10O75333 385 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 LDHAP00338 332 aaKnown RBP17.08■□□□□ 0.32
RPAIN-206ENST00000539417 RPL17P18621 184 aaKnown RBP17.08■□□□□ 0.32
RPAIN-206ENST00000539417 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-206ENST00000539417 FAM171A1Q5VUB5 890 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 HS2ST1Q7LGA3 356 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 CD302Q8IX05 232 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 GUF1Q8N442 669 aaKnown RBP17.08■□□□□ 0.32
RPAIN-206ENST00000539417 XXYLT1Q8NBI6 393 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 FEZF2Q8TBJ5 459 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 GPT2Q8TD30 523 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 CCDC34Q96HJ3 373 aa17.08■□□□□ 0.32
RPAIN-206ENST00000539417 POP1Q99575 1024 aaKnown RBP17.08■□□□□ 0.32
RPAIN-206ENST00000539417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 CARNS1A5YM72 827 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 ZNF233A6NK53 670 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 PDXKO00764 312 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 SPTLC1O15269 473 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 IL18RAPO95256 599 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 SMC2O95347 1197 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 NR3C1P04150 777 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 CNPP09543 421 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 TKTP29401 623 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 RPL9P32969 192 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 GLUD2P49448 558 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 PMS1P54277 932 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 DSG1Q02413 1049 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 ADAM15Q13444 863 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 KCNC3Q14003 757 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 SNRNP35Q16560 246 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 ZCWPW2Q504Y3 356 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 CEP57Q86XR8 500 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 OR5B17Q8NGF7 314 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 CXorf38Q8TB03 319 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 RIN2Q8WYP3 895 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 DDX27Q96GQ7 796 aaKnown RBP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 GBP4Q96PP9 640 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 KLHL5Q96PQ7 755 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 CLDND1Q9NY35 253 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 TRAF3IP3Q9Y228 551 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 DERAQ9Y315 318 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 C2CD2Q9Y426 696 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 BRWD1Q9NSI6 2320 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 VCANP13611 3396 aa17.07■□□□□ 0.32
RPAIN-206ENST00000539417 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPAIN-206ENST00000539417 CYP3A5P20815 502 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 SNRPFP62306 86 aaKnown RBP17.06■□□□□ 0.32
RPAIN-206ENST00000539417 TFAMQ00059 246 aaKnown RBP17.06■□□□□ 0.32
RPAIN-206ENST00000539417 CYP24A1Q07973 514 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 USP41Q3LFD5 358 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 C9orf57Q5W0N0 161 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 RSPO2Q6UXX9 243 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-206ENST00000539417 EFHBQ8N7U6 833 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 BEST2Q8NFU1 509 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 PABPC5Q96DU9 382 aaKnown RBP17.06■□□□□ 0.32
RPAIN-206ENST00000539417 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 UBE2ZQ9H832 354 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-206ENST00000539417 RMND1Q9NWS8 449 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 DPP3Q9NY33 737 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 CLEC1BQ9P126 229 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 BARX2Q9UMQ3 279 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-206ENST00000539417 SCN1AP35498 2009 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 PLXNA3P51805 1871 aa17.06■□□□□ 0.32
RPAIN-206ENST00000539417 ANO9A1A5B4 782 aa17.05■□□□□ 0.32
RPAIN-206ENST00000539417 TRIM49BA6NDI0 452 aa17.05■□□□□ 0.32
RPAIN-206ENST00000539417 H3BQ06 376 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-206ENST00000539417 PIRO00625 290 aa17.05■□□□□ 0.32
RPAIN-206ENST00000539417 KIAA0391O15091 583 aaKnown RBP17.05■□□□□ 0.32
RPAIN-206ENST00000539417 TEX28O15482 410 aa17.05■□□□□ 0.32
RPAIN-206ENST00000539417 ADAM12O43184 909 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms