RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 TAS2R40P59535 323 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 KRT17Q04695 432 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 MKRN4PQ13434 485 aaPredicted RBP7.41□□□□□ -1.22
PROM1-219ENST00000539194 GKAP1Q5VSY0 366 aaPredicted RBP7.41□□□□□ -1.22
PROM1-219ENST00000539194 LLGL2Q6P1M3 1020 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 MCF2L2Q86YR7 1114 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 CACNA2D3Q8IZS8 1091 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 POMGNT1Q8WZA1 660 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 GPRASP2Q96D09 838 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 L3MBTL3Q96JM7 780 aaPredicted RBP7.41□□□□□ -1.22
PROM1-219ENST00000539194 SH2D3AQ9BRG2 576 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 CD248Q9HCU0 757 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 NINJ2Q9NZG7 142 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 RASAL2Q9UJF2 1139 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 ZNF214Q9UL59 606 aaPredicted RBP7.41□□□□□ -1.22
PROM1-219ENST00000539194 CCPG1Q9ULG6 757 aa7.41□□□□□ -1.22
PROM1-219ENST00000539194 MAFBQ9Y5Q3 323 aaPredicted RBP7.41□□□□□ -1.22
PROM1-219ENST00000539194 FNDC1Q4ZHG4 1894 aaPredicted RBP7.41□□□□□ -1.22
PROM1-219ENST00000539194 CLRN2A0PK11 232 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 WDR64B1ANS9 1081 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 CTNND1O60716 968 aaKnown RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 CCNG1P51959 295 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 KRT76Q01546 638 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 CCDC15Q0P6D6 951 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 OASLQ15646 514 aaKnown RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 CCNG2Q16589 344 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 WDR72Q3MJ13 1102 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 ZNF772Q68DY9 489 aaPredicted RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 ZNF622Q969S3 477 aaKnown RBP eCLIP7.4□□□□□ -1.22
PROM1-219ENST00000539194 ELMO3Q96BJ8 720 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 SAAL1Q96ER3 474 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 C12orf42Q96LP6 360 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 TACO1Q9BSH4 297 aaKnown RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 HAUS2Q9NVX0 235 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 CTNNAL1Q9UBT7 734 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 GOLGA8IPA6NC78 632 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 GOLGA8JA6NMD2 632 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 VWA5AO00534 786 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 MAFGO15525 162 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 FAM155BO75949 473 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 DLATP10515 647 aaKnown RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 RRM1P23921 792 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 ARL2P36404 184 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 NCALDP61601 193 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 SP2Q02086 613 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 MOGSQ13724 837 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 TARBP2Q15633 366 aaKnown RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 PARP9Q8IXQ6 854 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 ZNF526Q8TF50 670 aaPredicted RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 KIFAP3Q92845 792 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 SNF8Q96H20 258 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 FAM81BQ96LP2 452 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 ABCF3Q9NUQ8 709 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 ANKFY1Q9P2R3 1169 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 FARP1Q9Y4F1 1045 aaPredicted RBP7.4□□□□□ -1.22
PROM1-219ENST00000539194 PCDHB2Q9Y5E7 798 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 TSC2P49815 1807 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 PASKQ96RG2 1323 aa7.4□□□□□ -1.22
PROM1-219ENST00000539194 FOXO6A8MYZ6 492 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 RAD21O60216 631 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 ECEL1O95672 775 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 EGFRP00533 1210 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 GH1P01241 217 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 C1QAP02745 245 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 FGFR1P11362 822 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 SOX10P56693 466 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 SYCP3Q8IZU3 236 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 GPD1LQ8N335 351 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 WDTC1Q8N5D0 677 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 NIPA2Q8N8Q9 360 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 GLIS1Q8NBF1 620 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 UTP4Q969X6 686 aaKnown RBP7.4□□□□□ -1.23
PROM1-219ENST00000539194 ZNF653Q96CK0 615 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 PHACTR1Q9C0D0 580 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 DHX33Q9H6R0 707 aaKnown RBP7.4□□□□□ -1.23
PROM1-219ENST00000539194 ZMYND8Q9ULU4 1186 aaPredicted RBP7.4□□□□□ -1.23
PROM1-219ENST00000539194 NUMBLQ9Y6R0 609 aa7.4□□□□□ -1.23
PROM1-219ENST00000539194 DDX39AO00148 427 aaKnown RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 RASGRF2O14827 1237 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 CHUKO15111 745 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ASMTLO95671 621 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ITGA8P53708 1063 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 CAV1Q03135 178 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 IKQ13123 557 aaPredicted RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 NBPF9Q3BBW0 867 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 SEL1L2Q5TEA6 688 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 DAB2IPQ5VWQ8 1189 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 SH2D5Q6ZV89 423 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 TRPM8Q7Z2W7 1104 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 CCDC60Q8IWA6 550 aaPredicted RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 ZCCHC9Q8N567 271 aaKnown RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 CXorf38Q8TB03 319 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ATG4AQ8WYN0 398 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 FAM84AQ96KN4 292 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 TRAIPQ9BWF2 469 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 ZBTB12Q9Y330 459 aaPredicted RBP7.39□□□□□ -1.23
PROM1-219ENST00000539194 DENND3A2RUS2 1198 aa7.39□□□□□ -1.23
PROM1-219ENST00000539194 SPATA31C2B4DYI2 1134 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms