RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ZNF516Q92618 1163 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 TMX1Q9H3N1 280 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 SIX2Q9NPC8 291 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 PRDM5Q9NQX1 630 aaPredicted RBP16.6■□□□□ 0.25
VAMP1-207ENST00000539047 PRKAG2Q9UGJ0 569 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 DNAJC12Q9UKB3 198 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 TBX21Q9UL17 535 aa16.6■□□□□ 0.25
VAMP1-207ENST00000539047 A0A0U1RQF3 1178 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 LRRC53A6NM62 1247 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 IPO7O95373 1038 aaKnown RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 SKILP12757 684 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 IBSPP21815 317 aaPredicted RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 MSNP26038 577 aaKnown RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 ATICP31939 592 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 NOP14P78316 857 aaKnown RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 RBP5P82980 135 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 GCNT1Q02742 428 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 GOLGA8FQ08AF8 430 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 GOLGA8DPQ0D2H9 430 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 MYO1EQ12965 1108 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 MBTPS1Q14703 1052 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 LRRC26Q2I0M4 334 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 PRPF38BQ5VTL8 546 aaKnown RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 IQCEQ6IPM2 695 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 TMTC1Q8IUR5 882 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 SYN2Q92777 582 aaPredicted RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 ZNF560Q96MR9 790 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 RSAD1Q9HA92 442 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 UBE2TQ9NPD8 197 aaPredicted RBP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 RGS18Q9NS28 235 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 KLK14Q9P0G3 267 aa16.59■□□□□ 0.25
VAMP1-207ENST00000539047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
VAMP1-207ENST00000539047 EPHB6O15197 1021 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 ARHGAP6O43182 974 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 OFD1O75665 1012 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 NOL4O94818 638 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 EOMESO95936 686 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 ITGB3P05106 788 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 KCNE1P15382 129 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 RAG1P15918 1043 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 FERP16591 822 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 CCL23P55773 120 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 ARID5BQ14865 1188 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 ARHGAP44Q17R89 818 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 TDRD12Q587J7 1177 aaKnown RBP16.58■□□□□ 0.24
VAMP1-207ENST00000539047 VPS36Q86VN1 386 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 ECHDC2Q86YB7 292 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 LMO3Q8TAP4 145 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 URGCPQ8TCY9 931 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 BAP1Q92560 729 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 SEMA4DQ92854 862 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
VAMP1-207ENST00000539047 DEF6Q9H4E7 631 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 LRFN2Q9ULH4 789 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 BZW2Q9Y6E2 419 aaKnown RBP16.58■□□□□ 0.24
VAMP1-207ENST00000539047 MICAL3Q7RTP6 2002 aa16.58■□□□□ 0.24
VAMP1-207ENST00000539047 HOXA2O43364 376 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 MGEA5O60502 916 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 NBNO60934 754 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 VNN1O95497 513 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 CYP3A5P20815 502 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 POLR2BP30876 1174 aaKnown RBP16.57■□□□□ 0.24
VAMP1-207ENST00000539047 CYP2C18P33260 490 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 MLH1P40692 756 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 PNPLA4P41247 253 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 DRAP1Q14919 205 aaPredicted RBP16.57■□□□□ 0.24
VAMP1-207ENST00000539047 ZNF667Q5HYK9 610 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 GLRA4Q5JXX5 417 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 GLB1LQ6UWU2 654 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 TMEM199Q8N511 208 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 JAKMIP2Q96AA8 810 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 FAXDC2Q96IV6 333 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 PI4K2AQ9BTU6 479 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 DNAI2Q9GZS0 605 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 PLAGL2Q9UPG8 496 aa16.57■□□□□ 0.24
VAMP1-207ENST00000539047 UMODL1Q5DID0 1318 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 SMIM28A0A1B0GU29 152 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 F8VZ95 297 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 CCP110O43303 1012 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 ASS1P00966 412 aaKnown RBP16.56■□□□□ 0.24
VAMP1-207ENST00000539047 CXCL10P02778 98 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 SERPING1P05155 500 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 THP07101 528 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 HNRNPH3P31942 346 aaKnown RBP16.56■□□□□ 0.24
VAMP1-207ENST00000539047 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
VAMP1-207ENST00000539047 SOX5P35711 763 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 USP8P40818 1118 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 MYL6P60660 151 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 TNNC1P63316 161 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 CCZ1BP86790 482 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
VAMP1-207ENST00000539047 CDK17Q00537 523 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 APBA1Q02410 837 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 XKR4Q5GH76 650 aa16.56■□□□□ 0.24
VAMP1-207ENST00000539047 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms