RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 RABL2BQ9UNT1 228 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 SMG5Q9UPR3 1016 aaKnown RBP9.59□□□□□ -0.87
SNHG1-209ENST00000538654 NAALADL1Q9UQQ1 740 aa9.59□□□□□ -0.87
SNHG1-209ENST00000538654 RASA4BC9J798 803 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 PRPF4O43172 522 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 RASA4O43374 803 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 EDIL3O43854 480 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ATP9AO75110 1047 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 TJP3O95049 919 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 NTSR2O95665 410 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 P4HBP07237 508 aaKnown RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 T-ENOLP0DO92 83 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 MUTP22033 750 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 CACNB1Q02641 598 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 KRT17Q04695 432 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 POU5F1BQ06416 359 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SLC34A1Q06495 639 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 NFIL3Q16649 462 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 INO80DQ53TQ3 878 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ARSHQ5FYA8 562 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 AADACL2Q6P093 401 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ZNF449Q6P9G9 518 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SNX32Q86XE0 403 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 CCDC89Q8N998 374 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 KLHL23Q8NBE8 558 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SUPT20HQ8NEM7 779 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ERMNQ8TAM6 284 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 CRAMP1Q96RY5 1269 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 AGPAT1Q99943 283 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 POTECB2RU33 542 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 EDF1O60869 148 aaKnown RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ASMTLO95671 621 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SCGB1D2O95969 90 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 BCRP11274 1271 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 COMTP21964 271 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 HIBADHP31937 336 aaKnown RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 FMO5P49326 533 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 CASP5P51878 434 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 RACK1P63244 317 aaKnown RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 GSTO1P78417 241 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 AP1B1Q10567 949 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 PTK6Q13882 451 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 GIT2Q14161 759 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 PDK4Q16654 411 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 KYNUQ16719 465 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ASPRV1Q53RT3 343 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 LRRC74BQ6ZQY2 392 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ZC3H18Q86VM9 953 aaKnown RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SFR1Q86XK3 245 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 FAM186BQ8IYM0 893 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SLFN12Q8IYM2 578 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SCG3Q8WXD2 468 aaKnown RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 STMN2Q93045 179 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 EYA3Q99504 573 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 FOXP3Q9BZS1 431 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 APEX2Q9UBZ4 518 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ZNF212Q9UDV6 495 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ASTN1O14525 1302 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SPATA31A1Q5TZJ5 1347 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 TMEM110-MUSTN1A8MSY1 372 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 C2CD2LO14523 706 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SORBS3O60504 671 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ABHD2P08910 425 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 PYGMP11217 842 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ATF2P15336 505 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 PRDX5P30044 214 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 HOXD13P35453 343 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 RANBP1P43487 201 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SEC13P55735 322 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 DNAJC3Q13217 504 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 CAPN12Q6ZSI9 719 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ZDHHC14Q8IZN3 488 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SMC1BQ8NDV3 1235 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 UCMAQ8WVF2 138 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 C10orf82Q8WW14 230 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 GATA6Q92908 595 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 OPTNQ96CV9 577 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 GLT8D2Q9H1C3 349 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 MMADHCQ9H3L0 296 aaPredicted RBP9.58□□□□□ -0.88
SNHG1-209ENST00000538654 SYNCQ9H7C4 482 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 DNAJC18Q9H819 358 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 CLIC5Q9NZA1 410 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 NINJ2Q9NZG7 142 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 IL1RAPL1Q9NZN1 696 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 ANAPC5Q9UJX4 755 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 MINPP1Q9UNW1 487 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 DNM3Q9UQ16 869 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
SNHG1-209ENST00000538654 TNRC6CQ9HCJ0 1690 aaKnown RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 FAM221BA6H8Z2 402 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 MAP3K13O43283 966 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SPOPO43791 374 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 FTLP02792 175 aaPredicted RBP9.57□□□□□ -0.88
SNHG1-209ENST00000538654 SETSIPP0DME0 302 aa9.57□□□□□ -0.88
SNHG1-209ENST00000538654 GAP43P17677 238 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms