RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FAM192AQ9GZU8 254 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 NOCTQ9UK39 431 aaKnown RBP19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 MAGEA13PA6NCF6 341 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 TJP3O95049 919 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 CACNA2D1P54289 1103 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 GRIPAP1Q4V328 841 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 CEP128Q6ZU80 1094 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 STXBP4Q6ZWJ1 553 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 PRUNE1Q86TP1 453 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 TDRPQ86YL5 185 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 KIAA0825Q8IV33 1275 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 KSR1Q8IVT5 923 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 ZNF653Q96CK0 615 aa19.75■□□□□ 0.75
SFSWAP-207ENST00000538548 ZWINTO95229 277 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 RRM1P23921 792 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 VPS41P49754 854 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 SLC34A1Q06495 639 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 FYB2Q5VWT5 728 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 DPP8Q6V1X1 898 aaPredicted RBP19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 DSTYKQ6XUX3 929 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 LRRC74BQ6ZQY2 392 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 ZNF720Q7Z2F6 126 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 NOP9Q86U38 636 aaKnown RBP19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 MTDHQ86UE4 582 aaKnown RBP19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 ZC3H18Q86VM9 953 aaKnown RBP19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 CFAP57Q96MR6 1250 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM210AQ96ND0 272 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 SMC6Q96SB8 1091 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 PPP1R12CQ9BZL4 782 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 IRAK4Q9NWZ3 460 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 PCDHA1Q9Y5I3 950 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 SGPL1O95470 568 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 OTOAQ7RTW8 1153 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 ARHGAP22Q7Z5H3 698 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 CCDC89Q8N998 374 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 GATA6Q92908 595 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 FIZ1Q96SL8 496 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 EIF2AK1Q9BQI3 630 aaKnown RBP19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 BTBD10Q9BSF8 475 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 KIAA1586Q9HCI6 787 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 PDP2Q9P2J9 529 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 SEL1LQ9UBV2 794 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 VAV3Q9UKW4 847 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 NEU2Q9Y3R4 380 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 SBF2Q86WG5 1849 aa19.74■□□□□ 0.75
SFSWAP-207ENST00000538548 GCAP28676 217 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 MAGEA4P43358 317 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 C1orf186Q6ZWK4 172 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 KCTD1Q719H9 257 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 SLC9A9Q8IVB4 645 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 B4GALNT2Q8NHY0 566 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 FOXP3Q9BZS1 431 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 BTAF1O14981 1849 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM196BA6NMK8 535 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 MEIS2O14770 477 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 CAPN9O14815 690 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 RPA3P35244 121 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 QRICH1Q2TAL8 776 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 ACSBG2Q5FVE4 666 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 CYP4F22Q6NT55 531 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 PPFIBP2Q8ND30 876 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 RBM15Q96T37 977 aaKnown RBP eCLIP19.73■□□□□ 0.751e-7■■■■□ 22
SFSWAP-207ENST00000538548 TUBB6Q9BUF5 446 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 NYXQ9GZU5 481 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 EMSYQ7Z589 1322 aa19.73■□□□□ 0.75
SFSWAP-207ENST00000538548 P4HA2O15460 535 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 KRT36O76013 467 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 CA4P22748 312 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 CENPCQ03188 943 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 GABPAQ06546 454 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 AP1B1Q10567 949 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 TBC1D25Q3MII6 688 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 IZUMO3Q5VZ72 239 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 ZNF365Q70YC5 407 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM178BQ8IXR5 827 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 DTNBP1Q96EV8 351 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 PCMTD2Q9NV79 361 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 STX18Q9P2W9 335 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM86B1E9PN63 330 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM86B2P0C5J1 330 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 KRT15P19012 456 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 GSTA3Q16772 222 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 HHATQ5VTY9 493 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 NSMFQ6X4W1 530 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 FAM71AQ8IYT1 594 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 SYNCQ9H7C4 482 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 TBX10O75333 385 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 PSMG1O95456 288 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 KPNB1Q14974 876 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 EPC2Q52LR7 807 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 LARGE2Q8N3Y3 721 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 ZCCHC9Q8N567 271 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 RDH13Q8NBN7 331 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 PTPRN2Q92932 1015 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 NPHS2Q9NP85 383 aa19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 DMAP1Q9NPF5 467 aaPredicted RBP19.72■□□□□ 0.75
SFSWAP-207ENST00000538548 SMAPO00193 183 aa19.71■□□□□ 0.75
SFSWAP-207ENST00000538548 MSH4O15457 936 aa19.71■□□□□ 0.75
SFSWAP-207ENST00000538548 GSC2O15499 205 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms