RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RBBP8NLQ8NC74 664 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-205ENST00000538291 KIF2CQ99661 725 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 RRN3P2A6NIE6 340 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 HBP1O60381 514 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 CCDC22O60826 627 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 ATF7IP2Q5U623 682 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 SDE2Q6IQ49 451 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 ANKRD13AQ8IZ07 590 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 TSPAN17Q96FV3 270 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 REEP2Q9BRK0 252 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 MOV10L1Q9BXT6 1211 aaKnown RBP17.69■□□□□ 0.42
SCARB1-205ENST00000538291 GTPBP10A4D1E9 387 aaKnown RBP17.69■□□□□ 0.42
SCARB1-205ENST00000538291 EFCAB14O75071 495 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 ACADSBP45954 432 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 SYDE1Q6ZW31 735 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-205ENST00000538291 AGAP3Q96P47 875 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 MAD2L2Q9UI95 211 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 SERPIND1P05546 499 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 GNASQ5JWF2 1037 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 XRRA1Q6P2D8 792 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 PPP1R2P1Q96PQ5 205 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 SRPK1Q96SB4 655 aaKnown RBP17.69■□□□□ 0.42
SCARB1-205ENST00000538291 NT5C1AQ9BXI3 368 aa17.69■□□□□ 0.42
SCARB1-205ENST00000538291 NOP53Q9NZM5 478 aaKnown RBP17.69■□□□□ 0.42
SCARB1-205ENST00000538291 FBXO2Q9UK22 296 aaPredicted RBP17.69■□□□□ 0.42
SCARB1-205ENST00000538291 SPDYE5A6NIY4 337 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 EEF2KO00418 725 aaKnown RBP17.68■□□□□ 0.42
SCARB1-205ENST00000538291 NDUFS3O75489 264 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 OR1G1P47890 313 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 CPT1AP50416 773 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 STAT4Q14765 748 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 SPDYE7PQ495Y7 208 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 KRT35Q92764 455 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 PHF20Q9BVI0 1012 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 PDS5AQ29RF7 1337 aaKnown RBP17.68■□□□□ 0.42
SCARB1-205ENST00000538291 OCA2Q04671 838 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 FLOT2Q14254 428 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 STYK1Q6J9G0 422 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 RGS9BPQ6ZS82 235 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 CERKQ8TCT0 537 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 H0Y3Z8 333 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 CAMTA2O94983 1202 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 GGCXP38435 758 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 RALBP11234 206 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 FMO5P49326 533 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 PIGHQ14442 188 aaPredicted RBP17.68■□□□□ 0.42
SCARB1-205ENST00000538291 KRT72Q14CN4 511 aa17.68■□□□□ 0.42
SCARB1-205ENST00000538291 SUPT3HO75486 399 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 ABCE1P61221 599 aaKnown RBP17.67■□□□□ 0.42
SCARB1-205ENST00000538291 USP33Q8TEY7 942 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 RIT2Q99578 217 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 CCDC90BQ9GZT6 254 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.67■□□□□ 0.42
SCARB1-205ENST00000538291 LATS2Q9NRM7 1088 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 SELENONQ9NZV5 590 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 STOML1Q9UBI4 398 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 FOXN1O15353 648 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 EFCAB12Q6NXP0 572 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 RNF180Q86T96 592 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 CPA5Q8WXQ8 436 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 GLT1D1Q96MS3 346 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 KDM6BO15054 1643 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 IRF1P10914 325 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 SMIM5Q71RC9 77 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 DHX40Q8IX18 779 aaKnown RBP17.67■□□□□ 0.42
SCARB1-205ENST00000538291 KIRREL3Q8IZU9 778 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 C7orf25Q9BPX7 421 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 MXRA8Q9BRK3 442 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 YIPF2Q9BWQ6 316 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 YY1AP1Q9H869 796 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 NRKQ7Z2Y5 1582 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 CELF2O95319 508 aaKnown RBP17.67■□□□□ 0.42
SCARB1-205ENST00000538291 ALDH1A3P47895 512 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 POLE2P56282 527 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 LAMC2Q13753 1193 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 CATSPERBQ9H7T0 1116 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 ARHGEF38Q9NXL2 777 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.67■□□□□ 0.421e-7■■□□□ 13
SCARB1-205ENST00000538291 LIMA1Q9UHB6 759 aaKnown RBP17.67■□□□□ 0.42
SCARB1-205ENST00000538291 GMNCA6NCL1 334 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 CFAP99D6REC4 459 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 CCDC15Q0P6D6 951 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 PKN3Q6P5Z2 889 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 MMS22LQ6ZRQ5 1243 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 GSPT2Q8IYD1 628 aaKnown RBP17.67■□□□□ 0.42
SCARB1-205ENST00000538291 CLMNQ96JQ2 1002 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 DEFB129Q9H1M3 183 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 KLHL11Q9NVR0 708 aa17.67■□□□□ 0.42
SCARB1-205ENST00000538291 APRTP07741 180 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 COBLL1Q53SF7 1204 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 CLEC10AQ8IUN9 316 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 SLC30A5Q8TAD4 765 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 SLITRK1Q96PX8 696 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 EXOSC10Q01780 885 aaKnown RBP17.66■□□□□ 0.42
SCARB1-205ENST00000538291 WWP1Q9H0M0 922 aa17.66■□□□□ 0.42
SCARB1-205ENST00000538291 FCGRTP55899 365 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms