RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 MTMR3Q13615 1198 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 ALCAMQ13740 583 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 CD300LGQ6UXG3 332 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 GLYCTKQ8IVS8 523 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 SMG7Q92540 1137 aaKnown RBP23.38■■□□□ 1.33
CCDC78-215ENST00000538176 MSTO1Q9BUK6 570 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 KCNH6Q9H252 994 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 CDH22Q9UJ99 828 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 FBXW11Q9UKB1 542 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 CFAP45Q9UL16 551 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 PCDHB13Q9Y5F0 798 aa23.38■■□□□ 1.33
CCDC78-215ENST00000538176 H7C4K7 107 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 CUTAO60888 179 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 SPATA31D3P0C874 917 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 CXCL8P10145 99 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 NMT1P30419 496 aaKnown RBP23.37■■□□□ 1.33
CCDC78-215ENST00000538176 AMPD3Q01432 767 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 SPATA31D4Q6ZUB0 917 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 APPL2Q8NEU8 664 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 KCNG4Q8TDN1 519 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 HAPLN2Q9GZV7 340 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 MRPL44Q9H9J2 332 aaKnown RBP23.37■■□□□ 1.33
CCDC78-215ENST00000538176 OLFML3Q9NRN5 406 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.37■■□□□ 1.33
CCDC78-215ENST00000538176 TFIP11Q9UBB9 837 aaKnown RBP23.37■■□□□ 1.33
CCDC78-215ENST00000538176 STYXL1Q9Y6J8 313 aa23.37■■□□□ 1.33
CCDC78-215ENST00000538176 MYMKA6NI61 221 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 RFPL2O75678 378 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 SP100P23497 879 aaPredicted RBP23.36■■□□□ 1.33
CCDC78-215ENST00000538176 LRPAP1P30533 357 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 OR1D2P34982 312 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 ZBTB6Q15916 424 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 SEZ6Q53EL9 994 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 C3orf58Q8NDZ4 430 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 DNAJC19Q96DA6 116 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 KIF12Q96FN5 646 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 OXCT2Q9BYC2 517 aaPredicted RBP23.36■■□□□ 1.33
CCDC78-215ENST00000538176 TNMDQ9H2S6 317 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 ASB7Q9H672 318 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 DERAQ9Y315 318 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 PLXNA3P51805 1871 aa23.36■■□□□ 1.33
CCDC78-215ENST00000538176 TMEM221A6NGB7 291 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 M0R296 226 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 FAM189A1O60320 539 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 XYLBO75191 536 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 F13A1P00488 732 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 POU2F2P09086 479 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 TKTP29401 623 aaKnown RBP23.35■■□□□ 1.33
CCDC78-215ENST00000538176 BRCC3P46736 316 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 PPM1LQ5SGD2 360 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 ADALQ6DHV7 355 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 SFR1Q86XK3 245 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 IQUBQ8NA54 791 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 ZNF461Q8TAF7 563 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 NXPE3Q969Y0 559 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 C18orf25Q96B23 403 aaPredicted RBP23.35■■□□□ 1.33
CCDC78-215ENST00000538176 ZNF707Q96C28 371 aaPredicted RBP23.35■■□□□ 1.33
CCDC78-215ENST00000538176 SUSD3Q96L08 255 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 PANK2Q9BZ23 570 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 IGSF9Q9P2J2 1179 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 LIMD1Q9UGP4 676 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 CPSF3Q9UKF6 684 aaKnown RBP23.35■■□□□ 1.33
CCDC78-215ENST00000538176 MAFFQ9ULX9 164 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 CDY1Q9Y6F8 540 aa23.35■■□□□ 1.33
CCDC78-215ENST00000538176 ZFP37Q9Y6Q3 630 aaPredicted RBP23.35■■□□□ 1.33
CCDC78-215ENST00000538176 CLUHO75153 1309 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 MEFVO15553 781 aaPredicted RBP23.34■■□□□ 1.33
CCDC78-215ENST00000538176 MCM4P33991 863 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 ZC2HC1CQ53FD0 456 aaPredicted RBP23.34■■□□□ 1.33
CCDC78-215ENST00000538176 SLC8B1Q6J4K2 584 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 STXBP4Q6ZWJ1 553 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 CCDC65Q8IXS2 484 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 PBXIP1Q96AQ6 731 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 ACCSQ96QU6 501 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 STRA6Q9BX79 667 aa23.34■■□□□ 1.33
CCDC78-215ENST00000538176 MYO10Q9HD67 2058 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 FRMD3A2A2Y4 597 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 LACTBL1A8MY62 500 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 PPP1R37O75864 691 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 C8AP07357 584 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 IDEP14735 1019 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 TNFSF9P41273 254 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 MRPL58Q14197 206 aaKnown RBP23.33■■□□□ 1.33
CCDC78-215ENST00000538176 ENOX2Q16206 610 aaKnown RBP23.33■■□□□ 1.33
CCDC78-215ENST00000538176 VARS2Q5ST30 1063 aaKnown RBP23.33■■□□□ 1.33
CCDC78-215ENST00000538176 AXDND1Q5T1B0 1012 aaPredicted RBP23.33■■□□□ 1.33
CCDC78-215ENST00000538176 HFE2Q6ZVN8 426 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 PDILTQ8N807 584 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 BEST2Q8NFU1 509 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 PYM1Q9BRP8 204 aaKnown RBP23.33■■□□□ 1.33
CCDC78-215ENST00000538176 TMEM206Q9H813 350 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 MAGEF1Q9HAY2 307 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 PANK4Q9NVE7 773 aa23.33■■□□□ 1.33
CCDC78-215ENST00000538176 AGO2Q9UKV8 859 aaKnown RBP23.33■■□□□ 1.33
CCDC78-215ENST00000538176 VWA8A3KMH1 1905 aa23.33■■□□□ 1.32
CCDC78-215ENST00000538176 ARHGEF37A1IGU5 675 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 LDHAP00338 332 aaKnown RBP23.32■■□□□ 1.32
CCDC78-215ENST00000538176 ELF1P32519 619 aa23.32■■□□□ 1.32
CCDC78-215ENST00000538176 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
CCDC78-215ENST00000538176 SPATA1Q5VX52 437 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms