RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 MAFO75444 373 aaPredicted RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 MED24O75448 989 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 C22orf31O95567 290 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 FGBP02675 491 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 RSPH10BP0C881 870 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 CSF2RAP15509 400 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 ARNTP27540 789 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 LONP1P36776 959 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 CCT6AP40227 531 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 NASPP49321 788 aaPredicted RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 DNM2P50570 870 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 CCL23P55773 120 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 NUCB2P80303 420 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 CYP4A11Q02928 519 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 CTTNQ14247 550 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 RSPO4Q2I0M5 234 aaPredicted RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 NKAPLQ5M9Q1 402 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 ZNF618Q5T7W0 954 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 HAUS3Q68CZ6 603 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 EFCAB12Q6NXP0 572 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 FAM173BQ6P4H8 233 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 RUFY4Q6ZNE9 571 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 SV2BQ7L1I2 683 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 C16orf59Q7L2K0 433 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 TRMT1LQ7Z2T5 733 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 NT5DC4Q86YG4 428 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 KIAA0319LQ8IZA0 1049 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 TRAPPC12Q8WVT3 735 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 DNAJB3Q8WWF6 145 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 FAM46AQ96IP4 442 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 CEP170P1Q96L14 293 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 MYRFLQ96LU7 910 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 CEP89Q96ST8 783 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 CYP26B1Q9NR63 512 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 WRAP73Q9P2S5 460 aaPredicted RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 DBR1Q9UK59 544 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 ATP6V1DQ9Y5K8 247 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 SRPRBQ9Y5M8 271 aaKnown RBP6.6□□□□□ -1.35
DDB1-210ENST00000538129 CLIC4Q9Y696 253 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 SQORQ9Y6N5 450 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 TCHHQ07283 1943 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 LTBP2Q14767 1821 aa6.6□□□□□ -1.35
DDB1-210ENST00000538129 SCN5AQ14524 2016 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 UMODL1Q5DID0 1318 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 KDM3AQ9Y4C1 1321 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 LOXHD1Q8IVV2 1947 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 M0QZ92 97 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 ASAP2O43150 1006 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 ADAM23O75077 832 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 PPP6R2O75170 966 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 CHRNA1P02708 482 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 CXCL10P02778 98 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 DDIT3P35638 169 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 ANP32AP39687 249 aaKnown RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 UBA7P41226 1012 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 CRYBB1P53674 252 aaPredicted RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 EPHB4P54760 987 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 NPEPPSP55786 919 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 MRPS6P82932 125 aaKnown RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 FANCCQ00597 558 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 CEBPZQ03701 1054 aaKnown RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 SOX4Q06945 474 aaPredicted RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 PKP1Q13835 747 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 GPNMBQ14956 572 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 STK38Q15208 465 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 MTERF2Q49AM1 385 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 XKR9Q5GH70 373 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 HYIQ5T013 277 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 PSRC1Q6PGN9 363 aaPredicted RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 SULF2Q8IWU5 870 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 METTL13Q8N6R0 699 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 LINC01465Q8N7H1 131 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 USP38Q8NB14 1042 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 LINC00301Q8NCQ3 95 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 C3orf58Q8NDZ4 430 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 TCP11Q8WWU5 503 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 RNF34Q969K3 372 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 SCLYQ96I15 445 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 NECAB3Q96P71 396 aaPredicted RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 USP28Q96RU2 1077 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 UBL7Q96S82 380 aaPredicted RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 MAP7D2Q96T17 732 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 MMTAG2Q9BU76 263 aaKnown RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 CELF4Q9BZC1 486 aaKnown RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 TGIF2Q9GZN2 237 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 FAM49AQ9H0Q0 323 aaPredicted RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 DHX33Q9H6R0 707 aaKnown RBP6.59□□□□□ -1.35
DDB1-210ENST00000538129 RCOR1Q9UKL0 485 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 CYP8B1Q9UNU6 501 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 DNM3Q9UQ16 869 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 ZDHHC9Q9Y397 364 aa6.59□□□□□ -1.35
DDB1-210ENST00000538129 MYH15Q9Y2K3 1946 aa6.58□□□□□ -1.36
DDB1-210ENST00000538129 ABHD14A-ACY1A0A1B0GW23 586 aa6.58□□□□□ -1.36
DDB1-210ENST00000538129 TMEM150BA6NC51 233 aa6.58□□□□□ -1.36
DDB1-210ENST00000538129 PP2D1A8MPX8 630 aa6.58□□□□□ -1.36
DDB1-210ENST00000538129 SPTLC2O15270 562 aa6.58□□□□□ -1.36
DDB1-210ENST00000538129 NBNO60934 754 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms