RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 RPS6KA1Q15418 735 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 CCDC181Q5TID7 509 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 IER5Q5VY09 327 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 SLFN12LQ6IEE8 588 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 CCDC70Q6NSX1 233 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 TAPT1Q6NXT6 567 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 ARMCX2Q7L311 632 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 USP37Q86T82 979 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 SLC47A2Q86VL8 602 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 GTF3C2Q8WUA4 911 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 RFFLQ8WZ73 363 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 STIM2Q9P246 746 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 RNF14Q9UBS8 474 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 COG5Q9UP83 839 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 DIS3Q9Y2L1 958 aaKnown RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 SLC45A1Q9Y2W3 748 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 CNTNAP2Q9UHC6 1331 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 ASB14A6NK59 587 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 NOP56O00567 594 aaKnown RBP11.52□□□□□ -0.56
CLIP1-210ENST00000538120 MSCO60682 206 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 VNN1O95497 513 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 CPP00450 1065 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 CETPP11597 493 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 ABCB4P21439 1286 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 PAFAH1B1P43034 410 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.56
CLIP1-210ENST00000538120 PPARDQ03181 441 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 LAMTOR4Q0VGL1 99 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 TRADDQ15628 312 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 PTPROQ16827 1216 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 ZACNQ401N2 412 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 CFAP221Q4G0U5 840 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 TDRD10Q5VZ19 366 aaKnown RBP11.52□□□□□ -0.56
CLIP1-210ENST00000538120 FBXW10Q5XX13 1052 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 CDCA2Q69YH5 1023 aaPredicted RBP11.52□□□□□ -0.56
CLIP1-210ENST00000538120 NT5DC3Q86UY8 548 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 LRRC71Q8N4P6 559 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.56
CLIP1-210ENST00000538120 SEPT11Q9NVA2 429 aaKnown RBP11.52□□□□□ -0.56
CLIP1-210ENST00000538120 CCL15-CCL14A0A0B4J2E2 113 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 GOLGA8KD6RF30 607 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 CES2O00748 559 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 FAM189A1O60320 539 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 BUB1BO60566 1050 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-210ENST00000538120 ADORA2AP29274 412 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 EPHB4P54760 987 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 FMO1Q01740 532 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 ARHGAP1Q07960 439 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 TTLL4Q14679 1199 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 CCL15Q16663 113 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-210ENST00000538120 SCARA3Q6AZY7 606 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 CTNNBL1Q8WYA6 563 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-210ENST00000538120 DDX1Q92499 740 aaKnown RBP11.52□□□□□ -0.57
CLIP1-210ENST00000538120 ZBTB10Q96DT7 871 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 MSTO1Q9BUK6 570 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 ANKFY1Q9P2R3 1169 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 NFU1Q9UMS0 254 aa11.52□□□□□ -0.57
CLIP1-210ENST00000538120 ABLIM1O14639 778 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 MAP3K7O43318 606 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 GRIN3BO60391 1043 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 ZC3H11AO75152 810 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 ERLIN2O94905 339 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 FTLP02792 175 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 MMEP08473 750 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 RNASE9P60153 205 aaKnown RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 TCEAL1Q15170 157 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 SEZ6Q53EL9 994 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 C8orf74Q6P047 294 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 RINLQ6ZS11 566 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 LMBR1Q8WVP7 490 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 KATNBL1Q9H079 304 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 RNPEPQ9H4A4 650 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 SMARCAD1Q9H4L7 1026 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 CDHR5Q9HBB8 845 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 RBAKQ9NYW8 714 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 MORF4L1Q9UBU8 362 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 RBM47A0AV96 593 aaKnown RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 KCNK3O14649 394 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 LDHAP00338 332 aaKnown RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 CALCAP01258 141 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 HLA-DRAP01903 254 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 SRGAP2CP0DJJ0 459 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 CYP11B1P15538 503 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 GTF2A2P52657 109 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 GCNT1Q02742 428 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 IFT81Q8WYA0 676 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 HES6Q96HZ4 224 aa11.51□□□□□ -0.57
CLIP1-210ENST00000538120 ACO2Q99798 780 aaKnown RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 ZNFX1Q9P2E3 1918 aaKnown RBP11.51□□□□□ -0.57
CLIP1-210ENST00000538120 GAS2O43903 313 aaKnown RBP11.5□□□□□ -0.57
CLIP1-210ENST00000538120 ZEB2O60315 1214 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms