RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 SF3B1O75533 1304 aaKnown RBP eCLIP20.87■□□□□ 0.93
COPS7A-205ENST00000536872 BIN1O00499 593 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 LINC01565O15544 149 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 EXOC3O60645 756 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 GLUD2P49448 558 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 SNRPFP62306 86 aaKnown RBP20.87■□□□□ 0.93
COPS7A-205ENST00000536872 PTPN14Q15678 1187 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 USP41Q3LFD5 358 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 ELOA2Q8IYF1 753 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-205ENST00000536872 XXYLT1Q8NBI6 393 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 C3orf58Q8NDZ4 430 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 GOLGA5Q8TBA6 731 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 RIN2Q8WYP3 895 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-205ENST00000536872 HLA-CQ95604 372 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 FAM84AQ96KN4 292 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 KCTD10Q9H3F6 313 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 CGNQ9P2M7 1197 aaKnown RBP20.87■□□□□ 0.93
COPS7A-205ENST00000536872 STK39Q9UEW8 545 aa20.87■□□□□ 0.93
COPS7A-205ENST00000536872 COL6A3P12111 3177 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 PDXKO00764 312 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 CALUO43852 315 aaPredicted RBP20.86■□□□□ 0.93
COPS7A-205ENST00000536872 CYP3A5P20815 502 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 RBM10P98175 930 aaKnown RBP20.86■□□□□ 0.93
COPS7A-205ENST00000536872 SPATA1Q5VX52 437 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 LMBRD2Q68DH5 695 aaPredicted RBP20.86■□□□□ 0.93
COPS7A-205ENST00000536872 CD300LGQ6UXG3 332 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 EFCAB13Q8IY85 973 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 GUF1Q8N442 669 aaKnown RBP20.86■□□□□ 0.93
COPS7A-205ENST00000536872 TSPAN18Q96SJ8 248 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 KIAA1586Q9HCI6 787 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 DPP3Q9NY33 737 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 MAN1B1Q9UKM7 699 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 DERAQ9Y315 318 aa20.86■□□□□ 0.93
COPS7A-205ENST00000536872 GOLGA6L22H0YM25 854 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 PPEF2O14830 753 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 CLASP2O75122 1294 aaKnown RBP20.85■□□□□ 0.93
COPS7A-205ENST00000536872 NR3C1P04150 777 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 KCNA5P22460 613 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 KLRC2P26717 231 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 MCM4P33991 863 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 PRCPP42785 496 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 POU5F1Q01860 360 aaKnown RBP20.85■□□□□ 0.93
COPS7A-205ENST00000536872 TFF2Q03403 129 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 ELAVL2Q12926 359 aaKnown RBP20.85■□□□□ 0.93
COPS7A-205ENST00000536872 SNRNP35Q16560 246 aaKnown RBP20.85■□□□□ 0.93
COPS7A-205ENST00000536872 DUSP6Q16828 381 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 ZNF658Q5TYW1 1059 aaPredicted RBP20.85■□□□□ 0.93
COPS7A-205ENST00000536872 KIAA0319Q5VV43 1072 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 PRSS55Q6UWB4 352 aaPredicted RBP20.85■□□□□ 0.93
COPS7A-205ENST00000536872 GLYCTKQ8IVS8 523 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 CACTINQ8WUQ7 758 aaKnown RBP20.85■□□□□ 0.93
COPS7A-205ENST00000536872 CCDC127Q96BQ5 260 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 TTPALQ9BTX7 342 aa20.85■□□□□ 0.93
COPS7A-205ENST00000536872 PDCD11Q14690 1871 aaKnown RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 H3BQ06 376 aaPredicted RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 TMEM189-UBE2V1I3L0A0 370 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 TRAPPC3O43617 180 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 NCK2O43639 380 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 EFEMP2O95967 443 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 CNPP09543 421 aaKnown RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 DLATP10515 647 aaKnown RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 RPL17P18621 184 aaKnown RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 LRPAP1P30533 357 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 DSG1Q02413 1049 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 ADAM15Q13444 863 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 RTP2Q5QGT7 225 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 C12orf56Q8IXR9 622 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 RNF168Q8IYW5 571 aaPredicted RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 EFHBQ8N7U6 833 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 SPATA20Q8TB22 786 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 PABPC5Q96DU9 382 aaKnown RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 KLHL5Q96PQ7 755 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 EMILIN2Q9BXX0 1053 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 UBE2ZQ9H832 354 aaPredicted RBP20.84■□□□□ 0.93
COPS7A-205ENST00000536872 CHST7Q9NS84 486 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 THEGQ9P2T0 379 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 COG5Q9UP83 839 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 SSX2IPQ9Y2D8 614 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 C2CD2Q9Y426 696 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 ANK1P16157 1881 aa20.84■□□□□ 0.93
COPS7A-205ENST00000536872 LILRB3O75022 631 aa20.83■□□□□ 0.93
COPS7A-205ENST00000536872 TKTP29401 623 aaKnown RBP20.83■□□□□ 0.93
COPS7A-205ENST00000536872 NDUFV1P49821 464 aa20.83■□□□□ 0.93
COPS7A-205ENST00000536872 CLUL1Q15846 466 aa20.83■□□□□ 0.93
COPS7A-205ENST00000536872 C9orf57Q5W0N0 161 aa20.83■□□□□ 0.93
COPS7A-205ENST00000536872 CEP135Q66GS9 1140 aa20.83■□□□□ 0.93
COPS7A-205ENST00000536872 FBXL18Q96ME1 805 aa20.83■□□□□ 0.93
COPS7A-205ENST00000536872 POP1Q99575 1024 aaKnown RBP20.83■□□□□ 0.93
COPS7A-205ENST00000536872 TMEM191BP0C7N4 346 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 CASP4P49662 377 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 DLX2Q07687 328 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-205ENST00000536872 CYP24A1Q07973 514 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 SURF1Q15526 300 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 DSTYKQ6XUX3 929 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-205ENST00000536872 VN1R2Q8NFZ6 395 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 FNBP1Q96RU3 617 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 CDCA3Q99618 268 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-205ENST00000536872 DMAC2Q9NW81 257 aa20.82■□□□□ 0.92
COPS7A-205ENST00000536872 BARX2Q9UMQ3 279 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms