RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RPL17P18621 184 aaKnown RBP6.62□□□□□ -1.35
PRKDC-208ENST00000536710 HDCP19113 662 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 NOMO3P69849 1222 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 FMO1Q01740 532 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 STK3Q13188 491 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 GRAMD1BQ3KR37 738 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 OTUD7BQ6GQQ9 843 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 TSHZ1Q6ZSZ6 1077 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 XYLT1Q86Y38 959 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 LIX1LQ8IVB5 337 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 LGI4Q8N135 537 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 TMEM176AQ96HP8 235 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 MRGPRX1Q96LB2 322 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 SGCZQ96LD1 299 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 LMF1Q96S06 567 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 P2RX7Q99572 595 aaKnown RBP6.62□□□□□ -1.35
PRKDC-208ENST00000536710 ENKD1Q9H0I2 346 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 KCNH6Q9H252 994 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 PNPLA8Q9NP80 782 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 SACM1LQ9NTJ5 587 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 USP40Q9NVE5 1235 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 SIDT1Q9NXL6 827 aaKnown RBP6.62□□□□□ -1.35
PRKDC-208ENST00000536710 SLC23A1Q9UHI7 598 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 OAZ3Q9UMX2 235 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 POM121BA6NF01 834 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 ISM1B1AKI9 464 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 F5H423 210 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-208ENST00000536710 PAX4O43316 350 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 HOXA3O43365 443 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-208ENST00000536710 NOBOXO60393 691 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 CR2P20023 1033 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 TNFSF4P23510 183 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 CLRN1P58418 232 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 ZNF124Q15973 351 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 DACT2Q5SW24 774 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 ANKS6Q68DC2 871 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 FAM111BQ6SJ93 734 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 SEM1Q6ZVN7 128 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 DPP9Q86TI2 863 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 CCDC33Q8N5R6 958 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 OR2C3Q8N628 320 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 AOPEPQ8N6M6 819 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 SUCLG2Q96I99 432 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 BRD9Q9H8M2 597 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 AGO3Q9H9G7 860 aaKnown RBP6.61□□□□□ -1.35
PRKDC-208ENST00000536710 PTPRHQ9HD43 1115 aa6.61□□□□□ -1.35
PRKDC-208ENST00000536710 B5MCH6 92 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 MYO1FO00160 1098 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 FOXN3O00409 490 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-208ENST00000536710 STT3AP46977 705 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 CASP5P51878 434 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 PSMC1P62191 440 aaKnown RBP6.6□□□□□ -1.35
PRKDC-208ENST00000536710 PPP2CBP62714 309 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 PPP2CAP67775 309 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 ZNF543Q08ER8 600 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 GPR135Q8IZ08 494 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 NLGN4YQ8NFZ3 816 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-208ENST00000536710 OR6B3Q8NGW1 331 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 DEPTORQ8TB45 409 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 ZNF512Q96ME7 567 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-208ENST00000536710 CERS4Q9HA82 394 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 PPCSQ9HAB8 311 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 SPON1Q9HCB6 807 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 ARFGAP3Q9NP61 516 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-208ENST00000536710 CFAP97Q9P2B7 532 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 SRRDQ9UH36 339 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 ZDHHC8Q9ULC8 765 aa6.6□□□□□ -1.35
PRKDC-208ENST00000536710 ABHD14A-ACY1A0A1B0GW23 586 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 PMS2P1A4D2B8 440 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 NCK2O43639 380 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 TBC1D4O60343 1298 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 MATN4O95460 622 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 FOSP01100 380 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 GNAI2P04899 355 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 GJB1P08034 283 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 PARP1P09874 1014 aaKnown RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 ALAS1P13196 640 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 GNAT2P19087 354 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 EN2P19622 333 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 TRAPPC10P48553 1259 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 BTKQ06187 659 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 DHX8Q14562 1220 aaKnown RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 ZRSR2Q15696 482 aaKnown RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 FAM209BQ5JX69 171 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 FKBP15Q5T1M5 1219 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 ZNF783Q6ZMS7 281 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 SESTD1Q86VW0 696 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 MYLK4Q86YV6 388 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 POU5F2Q8N7G0 328 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 TFAP2CQ92754 450 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 OR14A2Q96R54 314 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 CPPED1Q9BRF8 314 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 NDC1Q9BTX1 674 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 UNKQ9C0B0 810 aaKnown RBP6.59□□□□□ -1.35
PRKDC-208ENST00000536710 VPS11Q9H270 941 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 GSTO2Q9H4Y5 243 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 STARD7Q9NQZ5 370 aa6.59□□□□□ -1.35
PRKDC-208ENST00000536710 STK32BQ9NY57 414 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms