RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 NPEPPSP55786 919 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 CCT2P78371 535 aaKnown RBP7.19□□□□□ -1.26
CLIP1-207ENST00000536634 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
CLIP1-207ENST00000536634 AMPD3Q01432 767 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 FAM214AQ32MH5 1076 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 FKBP15Q5T1M5 1219 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 ABHD15Q6UXT9 468 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 DBX2Q6ZNG2 339 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 DNAJC5GQ8N7S2 189 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 EXTL1Q92935 676 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 RAX2Q96IS3 184 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 TRIM8Q9BZR9 551 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 TFCP2L1Q9NZI6 479 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 NSD2O96028 1365 aa7.19□□□□□ -1.26
CLIP1-207ENST00000536634 LTN1O94822 1766 aa7.18□□□□□ -1.26
CLIP1-207ENST00000536634 PRAMEF4O60810 478 aa7.18□□□□□ -1.26
CLIP1-207ENST00000536634 LTA4HP09960 611 aaKnown RBP7.18□□□□□ -1.26
CLIP1-207ENST00000536634 HIBADHP31937 336 aaKnown RBP7.18□□□□□ -1.26
CLIP1-207ENST00000536634 CDKN1CP49918 316 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-207ENST00000536634 HHEXQ03014 270 aa7.18□□□□□ -1.26
CLIP1-207ENST00000536634 FAPQ12884 760 aa7.18□□□□□ -1.26
CLIP1-207ENST00000536634 ELAVL1Q15717 326 aaKnown RBP7.18□□□□□ -1.26
CLIP1-207ENST00000536634 TOR2AQ5JU69 321 aa7.18□□□□□ -1.26
CLIP1-207ENST00000536634 KCNK18Q7Z418 384 aa7.18□□□□□ -1.26
CLIP1-207ENST00000536634 ARL8AQ96BM9 186 aa7.18□□□□□ -1.26
CLIP1-207ENST00000536634 ZNF512Q96ME7 567 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-207ENST00000536634 ACRV1P26436 265 aa7.17□□□□□ -1.26
CLIP1-207ENST00000536634 MRPS9P82933 396 aaKnown RBP7.17□□□□□ -1.26
CLIP1-207ENST00000536634 MUM1Q2TAK8 710 aa7.17□□□□□ -1.26
CLIP1-207ENST00000536634 USP39Q53GS9 565 aaKnown RBP7.17□□□□□ -1.26
CLIP1-207ENST00000536634 COL23A1Q86Y22 540 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-207ENST00000536634 ELOA2Q8IYF1 753 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-207ENST00000536634 AUTS2Q8WXX7 1259 aa7.17□□□□□ -1.26
CLIP1-207ENST00000536634 BORCS6Q96GS4 357 aa7.17□□□□□ -1.26
CLIP1-207ENST00000536634 CCM2LQ9NUG4 571 aaPredicted RBP7.17□□□□□ -1.26
CLIP1-207ENST00000536634 SLC5A4Q9NY91 659 aa7.17□□□□□ -1.26
CLIP1-207ENST00000536634 WDR90Q96KV7 1748 aa7.17□□□□□ -1.26
CLIP1-207ENST00000536634 TTC21BQ7Z4L5 1316 aa7.17□□□□□ -1.26
CLIP1-207ENST00000536634 K7ESF4 209 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 NRP1O14786 923 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 IL2RBP14784 551 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 CTSSP25774 331 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 CANXP27824 592 aaKnown RBP7.16□□□□□ -1.26
CLIP1-207ENST00000536634 DUSP2Q05923 314 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 RNF207Q6ZRF8 634 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 Q6ZRM9 215 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 LILRA3Q8N6C8 439 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-207ENST00000536634 CNTD1Q8N815 330 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 GLB1L3Q8NCI6 653 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-207ENST00000536634 KCNH5Q8NCM2 988 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 OR5M3Q8NGP4 307 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 IL17DQ8TAD2 202 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 DNAJC28Q9NX36 388 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 CENPJQ9HC77 1338 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-207ENST00000536634 RAB3GAP2Q9H2M9 1393 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 C5P01031 1676 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 USP54Q70EL1 1684 aa7.16□□□□□ -1.26
CLIP1-207ENST00000536634 CDK11BP21127 795 aaKnown RBP7.15□□□□□ -1.26
CLIP1-207ENST00000536634 SCNN1GP51170 649 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 MEF2AQ02078 507 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-207ENST00000536634 NRN1LQ496H8 165 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 ANKRD35Q8N283 1001 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 MB21D1Q8N884 522 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 SNX33Q8WV41 574 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 MIEF2Q96C03 454 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 IFT122Q9HBG6 1241 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 GIT1Q9Y2X7 761 aa7.15□□□□□ -1.26
CLIP1-207ENST00000536634 CICQ96RK0 1608 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-207ENST00000536634 MON2Q7Z3U7 1717 aa7.15□□□□□ -1.27
CLIP1-207ENST00000536634 TOGARAM1Q9Y4F4 1720 aa7.15□□□□□ -1.27
CLIP1-207ENST00000536634 HOXA3O43365 443 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-207ENST00000536634 OSMP13725 252 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 WNT3AP56704 352 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 KLF1Q13351 362 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-207ENST00000536634 ADRM1Q16186 407 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 C19orf54Q5BKX5 351 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 C1QL3Q5VWW1 255 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 NECAB2Q7Z6G3 386 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 TAF1LQ8IZX4 1826 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 ANKRD36BQ8N2N9 1353 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 CBARPQ8N350 705 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-207ENST00000536634 IGSF1Q8N6C5 1336 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 IL17RAQ96F46 866 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 ZNF747Q9BV97 191 aa7.14□□□□□ -1.27
CLIP1-207ENST00000536634 CCNL1Q9UK58 526 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-207ENST00000536634 FAM208AQ9UK61 1670 aaKnown RBP7.13□□□□□ -1.27
CLIP1-207ENST00000536634 TTC21AQ8NDW8 1320 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 ITGA10O75578 1167 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 AMHP03971 560 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 GYPEP15421 78 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 MTNR1BP49286 362 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 RABGGTBP53611 331 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 DGCR2P98153 550 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 MRPL49Q13405 166 aaKnown RBP7.13□□□□□ -1.27
CLIP1-207ENST00000536634 RRP1BQ14684 758 aaKnown RBP7.13□□□□□ -1.27
CLIP1-207ENST00000536634 MFSD5Q6N075 450 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 BTNL9Q6UXG8 535 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 C1orf210Q8IVY1 113 aa7.13□□□□□ -1.27
CLIP1-207ENST00000536634 PRPF38AQ8NAV1 312 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms