RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MYLK3Q32MK0 819 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 DAB2IPQ5VWQ8 1189 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 FBXL19Q6PCT2 694 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 IYDQ6PHW0 289 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 VSTM1Q6UX27 236 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 CYB5R4Q7L1T6 521 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 FASTKD5Q7L8L6 764 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 MTDHQ86UE4 582 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 BPHLQ86WA6 291 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 DIS3L2Q8IYB7 885 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 FBXO25Q8TCJ0 367 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ESR2Q92731 530 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 NEUROD6Q96NK8 337 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 FNBP1Q96RU3 617 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 POP1Q99575 1024 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 HNRNPABQ99729 332 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 TUBGCP2Q9BSJ2 902 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TANGO6Q9C0B7 1094 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 TTYH3Q9C0H2 523 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 NSRP1Q9H0G5 558 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 SLC52A2Q9HAB3 445 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 ERVK-5Q9HDB9 667 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 FAM217BQ9NTX9 383 aaPredicted RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 FAIMQ9NVQ4 179 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 DDX56Q9NY93 547 aaKnown RBP3.96□□□□□ -1.78
MCF2-210ENST00000536274 KIAA1257Q9ULG3 409 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 SSX2IPQ9Y2D8 614 aa3.96□□□□□ -1.78
MCF2-210ENST00000536274 PCM1Q15154 2024 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 HEG1Q9ULI3 1381 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 BTBD11A6QL63 1104 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NOTOA8MTQ0 251 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 LGALS16A8MUM7 142 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ZBED4O75132 1171 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 SLC16A2P36021 539 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CRKLP46109 303 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 PFKPQ01813 784 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PPIDQ08752 370 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 CDC16Q13042 620 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 DCTN2Q13561 401 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 AUHQ13825 339 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 CYLC2Q14093 348 aaPredicted RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 EFTUD2Q15029 972 aaKnown RBP eCLIP3.95□□□□□ -1.78
MCF2-210ENST00000536274 MEA1Q16626 185 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 TMEM266Q2M3C6 531 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PROSER3Q2NL68 480 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NEK10Q6ZWH5 1172 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PATL1Q86TB9 770 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 SNX29P2Q8IUI4 249 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 RTKN2Q8IZC4 609 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 GLIS3Q8NEA6 775 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 SPATA20Q8TB22 786 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PIP4K2CQ8TBX8 421 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 GRIN3AQ8TCU5 1115 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 KAZALD1Q96I82 304 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NSMCE3Q96MG7 304 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CSRNP1Q96S65 589 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NEURL2Q9BR09 285 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 DCUN1D5Q9BTE7 237 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CFHR5Q9BXR6 569 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ZMYND12Q9H0C1 365 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 LRMDAQ9H2I8 198 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 SYNCQ9H7C4 482 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CNOT10Q9H9A5 744 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 WDR6Q9NNW5 1121 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 ARL8BQ9NVJ2 186 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 RNF181Q9P0P0 153 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ARMCX1Q9P291 453 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NOC2LQ9Y3T9 749 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 TELO2Q9Y4R8 837 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 MAD1L1Q9Y6D9 718 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PDS5AQ29RF7 1337 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 ARAP2Q8WZ64 1704 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 FAM237AA0A1B0GTK4 181 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 FUOMA2VDF0 154 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 GRID2IPA4D2P6 1211 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ANKRD63C9JTQ0 380 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 J3QRK9 145 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 K7EPI3 171 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 DDX3XO00571 662 aaKnown RBP eCLIP3.95□□□□□ -1.78
MCF2-210ENST00000536274 TEX28O15482 410 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PRPF3O43395 683 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 GUCY1B2O75343 617 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 MYBP10242 640 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CYP19A1P11511 503 aaPredicted RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 CETPP11597 493 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CYP2C9P11712 490 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 RPL10P27635 214 aaKnown RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 STX2P32856 288 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 NEK2P51955 445 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 AQP4P55087 323 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 TIMM10P62072 90 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 TNNC1P63316 161 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 CDK17Q00537 523 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 AP1B1Q10567 949 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 MSLNQ13421 630 aaPredicted RBP3.95□□□□□ -1.78
MCF2-210ENST00000536274 SH2D4BQ5SQS7 431 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 DENND2CQ68D51 928 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ITPRIPL1Q6GPH6 555 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 ELMSAN1Q6PJG2 1045 aa3.95□□□□□ -1.78
MCF2-210ENST00000536274 PADI6Q6TGC4 694 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms